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Gene

SPATS1

spermatogenesis associated serine rich 1

Summary

Cytogenetic location
6p21.1
Coordinates
Chromosome 6: 44,342,650–44,380,179 (GRCh38)
Exons
9 exons across 37.5 kb
Protein
300 amino acids
Also known as
SPATA8, FLJ25442, SRSP1
MANE Select transcript
ENST00000674044.1NM_001372081.1
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SPATS1 yet. The test sequences your whole genome, so your data includes it all the same.

How SPATS1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 6, with a bracket where SPATS1 sits. SPATS1 and 15 genes near it on chromosome 6, from 43,861,415 to 44,861,414.Chromosome 66p21.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q2744 Mb44.2 Mb44.4 Mb44.6 Mb44.8 MbLINC03040: 44,000,580–44,007,830, forward strandLINC03040MRPL14: 44,078,275–44,134,339, reverse strandMRPL14TMEM63B: 44,126,614–44,155,520, forward strandTMEM63BCAPN11: 44,158,811–44,184,401, forward strandCAPN11MYMX: 44,192,822–44,218,236, forward strandMYMXSLC29A1: 44,219,245–44,243,425, forward strandSLC29A1HSP90AB1: 44,237,395–44,253,888, forward strandSLC35B2: 44,253,872–44,257,890, reverse strandNFKBIE: 44,258,166–44,265,788, reverse strandTMEM151B: 44,270,450–44,307,506, forward strandTMEM151B: 44,273,194–44,378,957, forward strandDRC5: 44,278,718–44,297,725, reverse strandDRC5AARS2: 44,298,726–44,313,376, reverse strandAARS2SPATS1: 44,342,650–44,380,179, forward strandSPATS1CDC5L: 44,387,547–44,450,924, forward strandCDC5LSUPT3H: 44,809,317–45,377,953, reverse strandSUPT3HDiagram of SPATS1: 9 exons on the forward strand of chromosome 6Exon 1: 44,342,650–44,342,768, 119 basesExon 2: 44,343,096–44,343,234, 139 basesExon 3: 44,352,726–44,352,873, 148 basesExon 4: 44,360,446–44,360,570, 125 basesExon 5: 44,361,831–44,361,992, 162 basesExon 6: 44,368,379–44,368,499, 121 basesExon 7: 44,370,051–44,370,113, 63 basesExon 8: 44,376,358–44,376,473, 116 basesExon 9: 44,377,035–44,380,179, 3,145 bases1595′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.1 kb of the gene's 37.5 kb; 903 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SPATS1 gene: spermatogenesis associated serine rich 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/spats1

Vancouver

Dante Labs. SPATS1 gene: spermatogenesis associated serine rich 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/spats1

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