Skip to content
Use your HSA or FSA funds

Gene

CAPN11

calpain 11

Summary

Cytogenetic location
6p21.1
Coordinates
Chromosome 6: 44,158,820–44,184,401 (GRCh38)
Exons
23 exons across 25.6 kb
Protein
739 amino acids
MANE Select transcript
ENST00000398776.2NM_007058.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CAPN11 yet. The test sequences your whole genome, so your data includes it all the same.

How CAPN11 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 6, with a bracket where CAPN11 sits. CAPN11 and 17 genes near it on chromosome 6, from 43,671,611 to 44,671,610.Chromosome 66p21.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q2743.8 Mb44 Mb44.2 Mb44.4 Mb44.6 MbRSPH9: 43,644,229–43,674,358, forward strandRSPH9MRPS18A: 43,669,978–43,687,954, reverse strandMRPS18AVEGFA: 43,770,184–43,786,487, forward strandVEGFALINC03040: 44,000,580–44,007,830, forward strandLINC03040MRPL14: 44,078,275–44,134,339, reverse strandMRPL14TMEM63B: 44,126,614–44,155,520, forward strandTMEM63BCAPN11: 44,158,820–44,184,401, forward strandCAPN11MYMX: 44,192,822–44,218,236, forward strandMYMXSLC29A1: 44,219,245–44,243,425, forward strandSLC29A1HSP90AB1: 44,237,395–44,253,888, forward strandHSP90AB1SLC35B2: 44,253,872–44,257,890, reverse strandSLC35B2NFKBIE: 44,258,166–44,265,788, reverse strandNFKBIETMEM151B: 44,270,450–44,307,506, forward strand: 44,273,194–44,378,957, forward strandDRC5: 44,278,718–44,297,725, reverse strandDRC5AARS2: 44,298,726–44,313,376, reverse strandSPATS1: 44,342,650–44,380,179, forward strandSPATS1CDC5L: 44,387,547–44,450,924, forward strandCDC5LDiagram of CAPN11: 23 exons on the forward strand of chromosome 6Exon 1: 44,158,820–44,158,864, 45 basesExon 2: 44,166,758–44,166,829, 72 basesExon 3: 44,169,281–44,169,531, 251 basesExon 4: 44,169,906–44,169,975, 70 basesExon 5: 44,172,302–44,172,420, 119 basesExon 6: 44,172,940–44,173,073, 134 basesExon 7: 44,173,218–44,173,386, 169 basesExon 8: 44,176,068–44,176,151, 84 basesExon 9: 44,176,253–44,176,338, 86 basesExon 10: 44,176,581–44,176,655, 75 basesExon 11: 44,176,838–44,176,998, 161 basesExon 12: 44,177,242–44,177,420, 179 basesExon 13: 44,179,619–44,179,630, 12 basesExon 14: 44,179,952–44,180,163, 212 basesExon 15: 44,180,460–44,180,499, 40 basesExon 16: 44,180,597–44,180,662, 66 basesExon 17: 44,180,748–44,180,805, 58 basesExon 18: 44,180,933–44,180,997, 65 basesExon 19: 44,181,252–44,181,320, 69 basesExon 20: 44,182,941–44,183,019, 79 basesExon 21: 44,183,119–44,183,235, 117 basesExon 22: 44,183,705–44,183,763, 59 basesExon 23: 44,183,906–44,184,401, 496 bases15101520235′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.7 kb of the gene's 25.6 kb; 2,220 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CAPN11 gene: calpain 11. Retrieved 17 October 2026, from https://dantelabs.com/genes/capn11

Vancouver

Dante Labs. CAPN11 gene: calpain 11 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/capn11

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test