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Gene

RCC1

regulator of chromosome condensation 1

Summary

Cytogenetic location
1p35.3
Coordinates
Chromosome 1: 28,506,043–28,538,989 (GRCh38)
Exons
13 exons across 32.9 kb
Protein
421 amino acids
Previous symbols
CHC1
MANE Select transcript
ENST00000683442.1NM_001381865.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads RCC1 yet. The test sequences your whole genome, so your data includes it all the same.

How RCC1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 1, with a bracket where RCC1 sits. RCC1 and 14 genes near it on chromosome 1, from 28,022,516 to 29,022,515.Chromosome 11p35.3p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q4428.2 Mb28.4 Mb28.6 Mb28.8 Mb29 MbEYA3: 27,970,344–28,088,731, reverse strandEYA3PTAFR: 28,147,166–28,194,083, reverse strandPTAFRDNAJC8: 28,198,626–28,233,087, reverse strandDNAJC8ATP5IF1: 28,236,072–28,246,908, forward strandATP5IF1SESN2: 28,259,473–28,282,491, forward strandSESN2MED18: 28,329,002–28,335,976, forward strandMED18PHACTR4: 28,369,563–28,500,369, forward strandPHACTR4RCC1: 28,506,043–28,538,989, forward strandRCC1TRNAU1AP: 28,552,991–28,578,549, forward strandTRNAU1APTAF12: 28,587,829–28,648,364, reverse strandTAF12RAB42: 28,592,200–28,596,280, forward strandRAB42GMEB1: 28,668,280–28,719,353, forward strandGMEB1YTHDF2: 28,736,608–28,770,214, forward strandYTHDF2OPRD1: 28,812,089–28,871,267, forward strandOPRD1EPB41: 28,887,073–29,120,052, forward strandEPB41Diagram of RCC1: 13 exons on the forward strand of chromosome 1Exon 13: 1 known disease-causing siteExon 1: 28,506,043–28,506,084, 42 basesExon 2: 28,508,128–28,508,160, 33 basesExon 3: 28,508,830–28,508,905, 76 basesExon 4: 28,516,725–28,516,867, 143 basesExon 5: 28,529,858–28,529,939, 82 basesExon 6: 28,531,803–28,531,990, 188 basesExon 7: 28,532,171–28,532,350, 180 basesExon 8: 28,535,050–28,535,146, 97 basesExon 9: 28,535,258–28,535,380, 123 basesExon 10: 28,535,871–28,536,026, 156 basesExon 11: 28,536,262–28,536,381, 120 basesExon 12: 28,536,747–28,536,899, 153 basesExon 13: 28,537,832–28,538,989, 1,158 bases124681012135′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.6 kb of the gene's 32.9 kb; 1,266 of those bases code for the protein.

How a genome test reads RCC1

1

position in RCC1 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 32.9 kb of RCC1, introns included, not only the 2.6 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). RCC1 gene: regulator of chromosome condensation 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/rcc1

Vancouver

Dante Labs. RCC1 gene: regulator of chromosome condensation 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/rcc1

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