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Gene

PTPRT

protein tyrosine phosphatase receptor type T

Summary

Cytogenetic location
20q12-q13.11
Coordinates
Chromosome 20: 42,072,756–43,189,906 (GRCh38)
Exons
31 exons across 1,117.2 kb
Protein
1,441 amino acids
Also known as
RPTPrho, KIAA0283
MANE Select transcript
ENST00000373187.6NM_007050.6
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PTPRT yet. The test sequences your whole genome, so your data includes it all the same.

How PTPRT is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 20, with a bracket where PTPRT sits. PTPRT and 19 genes near it on chromosome 20, from 40,955,605 to 44,307,057.Chromosome 2020q12-q13.11p13p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q12q13.11q13.12q13.13q13.2q13.31q13.32q13.3341 Mb41.5 Mb42 Mb42.5 Mb43 Mb43.5 Mb44 MbTOP1: 41,028,815–41,124,487, forward strandTOP1PLCG1: 41,136,931–41,196,801, forward strandPLCG1ZHX3: 41,178,448–41,317,783, reverse strandZHX3LPIN3: 41,340,786–41,360,583, forward strandLPIN3EMILIN3: 41,359,962–41,366,855, reverse strandEMILIN3CHD6: 41,402,083–41,618,555, reverse strandCHD6PTPRT: 42,072,756–43,189,906, reverse strandPTPRTSRSF6: 43,457,875–43,504,984, forward strandSRSF6: 43,458,054–43,541,881, forward strandL3MBTL1: 43,489,442–43,550,954, forward strandL3MBTL1: 43,540,171–43,569,498, forward strandSGK2: 43,558,968–43,588,237, forward strandIFT52: 43,590,895–43,647,299, forward strandMYBL2: 43,667,005–43,716,495, forward strandMYBL2GTSF1L: 43,726,164–43,727,002, reverse strandGTSF1LTOX2: 43,914,802–44,069,616, forward strandTOX2JPH2: 44,097,006–44,189,032, reverse strandJPH2OSER1: 44,195,939–44,219,957, reverse strandOSER1GDAP1L1: 44,247,099–44,280,947, forward strandGDAP1L1FITM2: 44,289,046–44,311,257, reverse strandFITM2Diagram of PTPRT: 31 exons on the reverse strand of chromosome 20Exon 31: 42,072,756–42,080,932, 8,177 basesExon 30: 42,081,882–42,082,017, 136 basesExon 29: 42,084,682–42,084,845, 164 basesExon 28: 42,085,728–42,085,853, 126 basesExon 27: 42,098,421–42,098,552, 132 basesExon 26: 42,102,124–42,102,297, 174 basesExon 25: 42,104,569–42,104,718, 150 basesExon 24: 42,106,786–42,106,921, 136 basesExon 23: 42,110,333–42,110,487, 155 basesExon 22: 42,115,199–42,115,315, 117 basesExon 21: 42,118,403–42,118,500, 98 basesExon 20: 42,119,935–42,119,971, 37 basesExon 19: 42,128,754–42,128,830, 77 basesExon 18: 42,141,915–42,142,002, 88 basesExon 17: 42,161,352–42,161,542, 191 basesExon 16: 42,199,240–42,199,388, 149 basesExon 15: 42,236,229–42,236,258, 30 basesExon 14: 42,248,687–42,248,822, 136 basesExon 13: 42,282,489–42,282,525, 37 basesExon 12: 42,315,723–42,315,996, 274 basesExon 11: 42,350,628–42,350,730, 103 basesExon 10: 42,352,084–42,352,285, 202 basesExon 9: 42,448,220–42,448,329, 110 basesExon 8: 42,472,266–42,472,562, 297 basesExon 7: 42,677,866–42,678,159, 294 basesExon 6: 42,756,462–42,756,636, 175 basesExon 5: 42,771,435–42,771,550, 116 basesExon 4: 42,780,218–42,780,299, 82 basesExon 3: 42,791,195–42,791,466, 272 basesExon 2: 42,885,807–42,885,932, 126 basesExon 1: 43,189,646–43,189,906, 261 bases312015′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 12.6 kb of the gene's 1,117.2 kb; 4,326 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PTPRT gene: protein tyrosine phosphatase receptor type T. Retrieved 16 October 2026, from https://dantelabs.com/genes/ptprt

Vancouver

Dante Labs. PTPRT gene: protein tyrosine phosphatase receptor type T [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/ptprt

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