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Gene

TOX2

TOX high mobility group box family member 2

Summary

Cytogenetic location
20q13.12
Coordinates
Chromosome 20: 43,914,852–44,069,616 (GRCh38)
Exons
9 exons across 154.8 kb
Protein
506 amino acids
Also known as
dJ1108D11.2, GCX-1
Previous symbols
C20orf100
MANE Select transcript
ENST00000341197.9NM_001098797.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads TOX2 yet. The test sequences your whole genome, so your data includes it all the same.

How TOX2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 20, with a bracket where TOX2 sits. TOX2 and 15 genes near it on chromosome 20, from 43,492,234 to 44,492,233.Chromosome 2020q13.12p13p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q12q13.11q13.12q13.13q13.2q13.31q13.32q13.3343.6 Mb43.8 Mb44 Mb44.2 Mb44.4 MbSRSF6: 43,457,875–43,504,984, forward strandSRSF6: 43,458,054–43,541,881, forward strandL3MBTL1: 43,489,442–43,550,954, forward strandL3MBTL1: 43,540,171–43,569,498, forward strandSGK2: 43,558,968–43,588,237, forward strandSGK2IFT52: 43,590,895–43,647,299, forward strandIFT52MYBL2: 43,667,005–43,716,495, forward strandMYBL2GTSF1L: 43,726,164–43,727,002, reverse strandGTSF1LTOX2: 43,914,852–44,069,616, forward strandTOX2JPH2: 44,097,006–44,189,032, reverse strandJPH2OSER1: 44,195,939–44,219,957, reverse strandOSER1GDAP1L1: 44,247,099–44,280,947, forward strandGDAP1L1FITM2: 44,289,046–44,311,257, reverse strandFITM2R3HDML: 44,337,043–44,351,238, forward strandR3HDMLHNF4A: 44,355,439–44,432,845, forward strandHNF4ATTPAL: 44,470,527–44,494,604, forward strandTTPALDiagram of TOX2: 9 exons on the forward strand of chromosome 20Exon 1: 43,914,852–43,914,990, 139 basesExon 2: 43,973,367–43,973,432, 66 basesExon 3: 44,006,547–44,006,792, 246 basesExon 4: 44,051,306–44,051,545, 240 basesExon 5: 44,054,299–44,054,526, 228 basesExon 6: 44,064,777–44,064,857, 81 basesExon 7: 44,065,712–44,066,107, 396 basesExon 8: 44,066,730–44,066,857, 128 basesExon 9: 44,068,650–44,069,616, 967 bases1595′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.5 kb of the gene's 154.8 kb; 1,521 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). TOX2 gene: TOX high mobility group box family member 2. Retrieved 17 October 2026, from https://dantelabs.com/genes/tox2

Vancouver

Dante Labs. TOX2 gene: TOX high mobility group box family member 2 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/tox2

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