Skip to content
Use your HSA or FSA funds

Gene

HOXB1

homeobox B1

Summary

Cytogenetic location
17q21.32
Coordinates
Chromosome 17: 48,528,526–48,531,011 (GRCh38)
Exons
2 exons across 2.5 kb
Protein
301 amino acids
Previous symbols
HOX2, HOX2I
MANE Select transcript
ENST00000239174.7NM_002144.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads HOXB1 yet. The test sequences your whole genome, so your data includes it all the same.

How HOXB1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 17, with a bracket where HOXB1 sits. HOXB1 and 23 genes near it on chromosome 17, from 48,029,769 to 49,029,768.Chromosome 1717q21.32p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.348.2 Mb48.4 Mb48.6 Mb48.8 Mb49 MbCOPZ2: 48,026,142–48,038,030, reverse strandCOPZ2NFE2L1: 48,047,889–48,088,647, forward strandNFE2L1CBX1: 48,070,052–48,107,848, reverse strandCBX1SNX11: 48,103,357–48,128,226, forward strandSNX11SKAP1: 48,133,433–48,430,275, reverse strandSKAP1HOXB1: 48,528,526–48,531,011, reverse strandHOXB1HOXB2: 48,540,894–48,545,115, reverse strandHOXB2HOXB3: 48,548,870–48,604,912, reverse strandHOXB3HOXB4: 48,575,507–48,578,429, reverse strandHOXB4HOXB5: 48,591,257–48,594,179, reverse strandHOXB5HOXB6: 48,595,525–48,605,011, reverse strandHOXB6HOXB7: 48,607,222–48,633,572, reverse strandHOXB8: 48,611,377–48,618,003, reverse strandHOXB9: 48,621,156–48,626,576, reverse strandPRAC2: 48,720,813–48,724,767, forward strandPRAC2PRAC1: 48,721,719–48,723,082, reverse strandPRAC1HOXB13: 48,724,750–48,729,076, reverse strandHOXB13TTLL6: 48,762,234–48,817,229, reverse strandTTLL6CALCOCO2: 48,830,971–48,872,910, forward strandCALCOCO2ATP5MC1: 48,892,765–48,895,875, forward strandATP5MC1UBE2Z: 48,908,368–48,929,062, forward strandUBE2ZSNF8: 48,928,972–48,944,842, reverse strandSNF8GIP: 48,958,554–48,968,596, reverse strandGIPIGF2BP1: 48,997,225–49,056,148, forward strandIGF2BP1Diagram of HOXB1: 2 exons on the reverse strand of chromosome 17Exon 2: 48,528,526–48,529,875, 1,350 basesExon 1: 48,530,328–48,531,011, 684 bases215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2 kb of the gene's 2.5 kb; 906 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). HOXB1 gene: homeobox B1. Retrieved 17 October 2026, from https://dantelabs.com/genes/hoxb1

Vancouver

Dante Labs. HOXB1 gene: homeobox B1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/hoxb1

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test