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Gene

CDC42SE1

CDC42 small effector 1

Summary

Cytogenetic location
1q21.3
Coordinates
Chromosome 1: 151,050,985–151,059,622 (GRCh38)
Exons
5 exons across 8.6 kb
Protein
79 amino acids
Also known as
SCIP1, SPEC1
MANE Select transcript
ENST00000357235.6NM_020239.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CDC42SE1 yet. The test sequences your whole genome, so your data includes it all the same.

How CDC42SE1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where CDC42SE1 sits. CDC42SE1 and 34 genes near it on chromosome 1, from 150,555,304 to 151,555,303.Chromosome 11q21.3p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44150.6 Mb150.8 Mb151 Mb151.2 Mb151.4 MbADAMTSL4: 150,549,369–150,560,937, forward strandADAMTSL4MCL1: 150,560,895–150,579,738, reverse strandMCL1ENSA: 150,599,671–150,629,633, reverse strandENSAGOLPH3L: 150,638,727–150,697,222, reverse strandGOLPH3LHORMAD1: 150,698,059–150,720,895, reverse strandHORMAD1CTSS: 150,730,079–150,765,957, reverse strandCTSSCTSK: 150,794,880–150,809,577, reverse strandCTSKARNT: 150,808,617–150,876,771, reverse strandARNTCTXND2: 150,887,136–150,913,292, forward strandCTXND2SETDB1: 150,926,263–150,964,748, forward strandSETDB1CERS2: 150,959,099–150,977,396, reverse strandCERS2ANXA9: 150,981,321–150,996,077, forward strandANXA9MINDY1: 150,995,125–151,008,376, reverse strandPRUNE1: 151,008,408–151,035,714, forward strandBNIPL: 151,036,321–151,047,720, forward strandBNIPLC1orf56: 151,047,746–151,051,986, forward strandC1orf56CDC42SE1: 151,050,985–151,059,622, reverse strandCDC42SE1MLLT11: 151,054,177–151,069,544, forward strandMLLT11GABPB2: 151,070,514–151,130,109, forward strandSEMA6C: 151,131,685–151,147,813, reverse strandSEMA6CTIPE2: 151,156,621–151,160,255, forward strandTIPE2SCNM1: 151,156,664–151,179,006, forward strandSCNM1LYSMD1: 151,159,748–151,165,948, reverse strandLYSMD1TMOD4: 151,169,984–151,176,284, reverse strandVPS72: 151,176,304–151,195,321, reverse strandPIP5K1A: 151,197,949–151,249,538, forward strandPIP5K1APSMD4: 151,254,709–151,279,502, forward strandPSMD4ZNF687: 151,281,502–151,292,180, forward strandZNF687PI4KB: 151,291,792–151,328,394, reverse strandPI4KBRFX5: 151,340,640–151,347,339, reverse strandRFX5SELENBP1: 151,364,157–151,372,716, reverse strandSELENBP1PSMB4: 151,399,556–151,401,941, forward strandPSMB4POGZ: 151,402,724–151,459,511, reverse strandPOGZCGN: 151,510,139–151,538,692, forward strandCGNTUFT1: 151,540,305–151,583,583, forward strandTUFT1Diagram of CDC42SE1: 5 exons on the reverse strand of chromosome 1Exon 5: 151,050,985–151,053,327, 2,343 basesExon 4: 151,054,231–151,054,321, 91 basesExon 3: 151,055,016–151,055,126, 111 basesExon 2: 151,055,677–151,055,993, 317 basesExon 1: 151,059,479–151,059,622, 144 bases543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3 kb of the gene's 8.6 kb; 240 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CDC42SE1 gene: CDC42 small effector 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/cdc42se1

Vancouver

Dante Labs. CDC42SE1 gene: CDC42 small effector 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/cdc42se1

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