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Gene

SLC9A5

solute carrier family 9 member A5

Summary

Cytogenetic location
16q22.1
Coordinates
Chromosome 16: 67,248,979–67,272,191 (GRCh38)
Exons
16 exons across 23.2 kb
Protein
896 amino acids
Also known as
NHE5
MANE Select transcript
ENST00000299798.16NM_004594.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SLC9A5 yet. The test sequences your whole genome, so your data includes it all the same.

How SLC9A5 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 16, with a bracket where SLC9A5 sits. SLC9A5 and 41 genes near it on chromosome 16, from 66,760,585 to 67,760,584.Chromosome 1616q22.1p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.366.8 Mb67 Mb67.2 Mb67.4 Mb67.6 MbTERB1: 66,754,640–66,801,620, reverse strandTERB1NAE1: 66,802,874–66,873,256, reverse strandNAE1CA7: 66,844,414–66,854,153, forward strandCA7PDP2: 66,878,589–66,895,754, forward strandPDP2CDH16: 66,908,122–66,919,187, reverse strandCDH16RRAD: 66,921,682–66,926,308, reverse strandRRADCIAO2B: 66,931,938–66,934,929, reverse strandCIAO2BCES2: 66,934,433–66,945,096, forward strandCES2CES3: 66,961,219–66,975,162, forward strandCES3CES4A: 66,988,574–67,010,417, forward strandCES4ACBFB: 67,028,984–67,101,058, forward strandCBFBPHAF1: 67,109,941–67,148,544, forward strandPHAF1B3GNT9: 67,142,023–67,151,260, reverse strandTRADD: 67,153,969–67,163,760, reverse strandFBXL8: 67,159,932–67,164,570, forward strand: 67,163,385–67,165,815, forward strandHSF4: 67,164,681–67,169,945, forward strandHSF4NOL3: 67,170,154–67,176,189, forward strandMATCAP1: 67,175,599–67,184,228, reverse strandEXOC3L1: 67,184,313–67,190,242, reverse strandE2F4: 67,192,117–67,198,919, forward strandE2F4ELMO3: 67,199,105–67,204,029, forward strandELMO3TMEM208: 67,227,103–67,229,281, forward strandTMEM208FHOD1: 67,229,387–67,247,539, reverse strandFHOD1SLC9A5: 67,248,979–67,272,191, forward strandSLC9A5PLEKHG4: 67,277,510–67,289,499, forward strandPLEKHG4KCTD19: 67,289,428–67,326,766, reverse strandKCTD19LRRC36: 67,326,798–67,385,221, forward strandLRRC36TPPP3: 67,389,027–67,393,518, reverse strandTPPP3ZDHHC1: 67,394,152–67,416,833, reverse strandZDHHC1HSD11B2: 67,430,652–67,437,553, forward strandHSD11B2ATP6V0D1: 67,437,523–67,481,227, reverse strandATP6V0D1AGRP: 67,482,571–67,483,552, reverse strandAGRPRIPOR1: 67,518,418–67,546,788, forward strandRIPOR1CTCF: 67,561,831–67,639,189, forward strandCTCFCARMIL2: 67,644,988–67,657,569, forward strandCARMIL2ACD: 67,657,512–67,660,810, reverse strandACDPARD6A: 67,660,350–67,664,266, forward strandPARD6AENKD1: 67,662,945–67,667,954, reverse strandC16orf86: 67,666,802–67,668,757, forward strandGFOD2: 67,674,527–67,719,352, reverse strandRANBP10: 67,723,070–67,806,563, reverse strandRANBP10Diagram of SLC9A5: 16 exons on the forward strand of chromosome 16Exon 1: 67,248,979–67,249,201, 223 basesExon 2: 67,252,542–67,252,844, 303 basesExon 3: 67,255,021–67,255,184, 164 basesExon 4: 67,255,393–67,255,471, 79 basesExon 5: 67,255,753–67,255,930, 178 basesExon 6: 67,256,469–67,256,689, 221 basesExon 7: 67,256,911–67,257,113, 203 basesExon 8: 67,257,345–67,257,434, 90 basesExon 9: 67,257,531–67,257,601, 71 basesExon 10: 67,258,318–67,258,447, 130 basesExon 11: 67,259,573–67,259,661, 89 basesExon 12: 67,259,820–67,259,946, 127 basesExon 13: 67,264,352–67,264,522, 171 basesExon 14: 67,265,040–67,265,106, 67 basesExon 15: 67,266,088–67,266,225, 138 basesExon 16: 67,270,738–67,272,191, 1,454 bases12468101214165′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.7 kb of the gene's 23.2 kb; 2,691 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SLC9A5 gene: solute carrier family 9 member A5. Retrieved 17 October 2026, from https://dantelabs.com/genes/slc9a5

Vancouver

Dante Labs. SLC9A5 gene: solute carrier family 9 member A5 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/slc9a5

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