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Gene

SEPTIN1

septin 1

Summary

Cytogenetic location
16p11.2
Coordinates
Chromosome 16: 30,378,135–30,382,561 (GRCh38)
Exons
11 exons across 4.4 kb
Protein
372 amino acids
Also known as
PNUTL3, Septin-1
Previous symbols
DIFF6, SEPT1
MANE Select transcript
ENST00000321367.8NM_001365977.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SEPTIN1 yet. The test sequences your whole genome, so your data includes it all the same.

How SEPTIN1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 16, with a bracket where SEPTIN1 sits. SEPTIN1 and 48 genes near it on chromosome 16, from 29,880,348 to 30,880,347.Chromosome 1616p11.2p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.330 Mb30.2 Mb30.4 Mb30.6 Mb30.8 MbSEZ6L2: 29,871,159–29,899,582, reverse strandSEZ6L2ASPHD1: 29,900,363–29,919,864, forward strandASPHD1KCTD13: 29,903,877–29,926,236, reverse strandKCTD13TMEM219: 29,940,885–29,973,052, forward strandTMEM219TAOK2: 29,973,675–29,992,262, forward strandHIRIP3: 29,992,314–29,996,126, reverse strandINO80E: 29,994,983–30,005,794, forward strandINO80EDOC2A: 30,005,507–30,023,270, reverse strandDOC2AFIMP1: 30,023,198–30,027,736, forward strandFIMP1TLCD3B: 30,024,425–30,052,978, reverse strand: 30,053,101–30,071,526, forward strandALDOA: 30,064,164–30,070,457, forward strandPPP4C: 30,075,967–30,085,391, forward strandTBX6: 30,085,793–30,091,933, reverse strandTBX6YPEL3: 30,092,314–30,096,915, reverse strandYPEL3GDPD3: 30,104,810–30,114,034, reverse strandGDPD3MAPK3: 30,114,104–30,123,506, reverse strandMAPK3CORO1A: 30,182,798–30,189,085, forward strandBOLA2B: 30,192,928–30,194,306, reverse strandBOLA2BSLX1A: 30,193,875–30,197,566, forward strandSLX1ASULT1A3: 30,198,059–30,204,324, forward strandSULT1A3NPIPB13: 30,222,893–30,255,268, reverse strandNPIPB13CD2BP2: 30,341,365–30,355,851, reverse strandTBC1D10B: 30,357,102–30,370,529, reverse strandTBC1D10BMYL11: 30,370,332–30,377,991, forward strandMYL11ZNF48: 30,378,106–30,400,108, forward strandZNF48SEPTIN1: 30,378,135–30,382,561, reverse strandSEPTIN1ZNF771: 30,407,143–30,431,108, forward strandDCTPP1: 30,413,033–30,430,162, reverse strandSEPHS2: 30,443,631–30,445,874, reverse strandSEPHS2ITGAL: 30,472,658–30,523,567, forward strandITGALZNF768: 30,524,001–30,527,328, reverse strandZNF768: 30,525,923–30,534,852, reverse strandZNF747: 30,529,534–30,535,347, reverse strandZNF747ZNF764: 30,553,764–30,558,524, reverse strandZNF688: 30,569,281–30,572,734, reverse strandZNF688ZNF785: 30,573,740–30,585,806, reverse strandZNF689: 30,602,558–30,624,012, reverse strandZNF689: 30,610,211–30,610,351, reverse strandPRR14: 30,650,696–30,656,427, forward strandPRR14FBRS: 30,658,431–30,670,810, forward strandFBRSSRCAP: 30,698,128–30,741,409, forward strandSRCAP: 30,704,067–30,745,169, forward strandTMEM265: 30,737,880–30,745,196, forward strandTMEM265PHKG2: 30,748,245–30,761,176, forward strandPHKG2CFAP119: 30,757,423–30,762,221, reverse strandRNF40: 30,761,561–30,780,421, forward strandZNF629: 30,778,456–30,787,214, reverse strandBCL7C: 30,818,695–30,894,302, reverse strandBCL7CDiagram of SEPTIN1: 11 exons on the reverse strand of chromosome 16Exon 11: 30,378,135–30,378,520, 386 basesExon 10: 30,378,610–30,378,700, 91 basesExon 9: 30,379,018–30,379,183, 166 basesExon 8: 30,379,435–30,379,534, 100 basesExon 7: 30,379,932–30,380,033, 102 basesExon 6: 30,381,127–30,381,244, 118 basesExon 5: 30,381,339–30,381,473, 135 basesExon 4: 30,381,760–30,381,883, 124 basesExon 3: 30,382,093–30,382,179, 87 basesExon 2: 30,382,275–30,382,365, 91 basesExon 1: 30,382,525–30,382,561, 37 bases11109876543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.4 kb of the gene's 4.4 kb; 1,119 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SEPTIN1 gene: septin 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/septin1

Vancouver

Dante Labs. SEPTIN1 gene: septin 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/septin1

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