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Gene

BCL7C

BAF chromatin remodeling complex subunit BCL7C

Summary

Cytogenetic location
16p11.2
Coordinates
Chromosome 16: 30,887,795–30,894,077 (GRCh38)
Exons
6 exons across 6.3 kb
Protein
217 amino acids
Also known as
SMARCJ3
MANE Select transcript
ENST00000215115.5NM_004765.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads BCL7C yet. The test sequences your whole genome, so your data includes it all the same.

How BCL7C is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 16, with a bracket where BCL7C sits. BCL7C and 45 genes near it on chromosome 16, from 30,390,936 to 31,390,935.Chromosome 1616p11.2p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.330.4 Mb30.6 Mb30.8 Mb31 Mb31.2 MbZNF48: 30,378,106–30,400,108, forward strandZNF48SEPTIN1: 30,378,135–30,395,991, reverse strandZNF771: 30,407,143–30,431,108, forward strandZNF771DCTPP1: 30,413,033–30,430,162, reverse strandDCTPP1SEPHS2: 30,443,631–30,445,874, reverse strandSEPHS2ITGAL: 30,472,658–30,523,567, forward strandZNF768: 30,524,001–30,527,328, reverse strand: 30,525,923–30,534,852, reverse strandZNF747: 30,529,534–30,535,347, reverse strandZNF747ZNF764: 30,553,764–30,558,524, reverse strandZNF764ZNF688: 30,569,281–30,572,734, reverse strandZNF688ZNF785: 30,573,740–30,585,806, reverse strandZNF785ZNF689: 30,602,558–30,624,012, reverse strandZNF689: 30,610,211–30,610,351, reverse strandPRR14: 30,650,696–30,656,427, forward strandPRR14FBRS: 30,658,431–30,670,810, forward strandFBRSSRCAP: 30,698,128–30,741,409, forward strand: 30,704,067–30,745,169, forward strandTMEM265: 30,737,880–30,745,196, forward strandPHKG2: 30,748,245–30,761,176, forward strandPHKG2CFAP119: 30,757,423–30,762,221, reverse strandCFAP119RNF40: 30,761,561–30,780,421, forward strandRNF40ZNF629: 30,778,456–30,787,214, reverse strandZNF629BCL7C: 30,887,795–30,894,077, reverse strandBCL7CCTF1: 30,896,607–30,903,547, forward strandCTF1FBXL19: 30,923,055–30,948,783, forward strandFBXL19ORAI3: 30,949,055–30,956,511, forward strandORAI3SETD1A: 30,957,294–30,984,664, forward strandSETD1AHSD3B7: 30,985,029–30,989,154, forward strandHSD3B7STX1B: 30,989,256–31,010,897, reverse strandSTX1BSTX4: 31,032,889–31,042,975, forward strandSTX4ZNF668: 31,059,772–31,074,240, reverse strandZNF668ZNF646: 31,074,394–31,084,196, forward strandZNF646PRSS53: 31,083,437–31,089,628, reverse strandPRSS53: 31,083,439–31,094,956, reverse strandVKORC1: 31,090,260–31,095,980, reverse strandBCKDK: 31,106,107–31,113,464, forward strandKAT8: 31,114,489–31,131,396, forward strandPRSS8: 31,131,433–31,135,727, reverse strandPRSS8PRSS36: 31,138,926–31,150,213, reverse strandPRSS36FUS: 31,180,131–31,196,963, forward strandFUSPYCARD: 31,201,486–31,203,450, reverse strandPYCARDTRIM72: 31,214,017–31,231,537, forward strandTRIM72PYDC1: 31,215,962–31,217,162, reverse strandPYDC1ITGAM: 31,259,954–31,332,892, forward strandITGAMITGAX: 31,355,134–31,382,999, forward strandITGAXDiagram of BCL7C: 6 exons on the reverse strand of chromosome 16Exon 6: 30,887,795–30,887,990, 196 basesExon 5: 30,888,860–30,888,945, 86 basesExon 4: 30,892,586–30,892,747, 162 basesExon 3: 30,892,840–30,892,948, 109 basesExon 2: 30,893,212–30,893,290, 79 basesExon 1: 30,893,853–30,894,077, 225 bases6543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 0.9 kb of the gene's 6.3 kb; 654 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). BCL7C gene: BAF chromatin remodeling complex subunit BCL7C. Retrieved 17 October 2026, from https://dantelabs.com/genes/bcl7c

Vancouver

Dante Labs. BCL7C gene: BAF chromatin remodeling complex subunit BCL7C [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/bcl7c

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