Gene
RBP5
retinol binding protein 5
- HGNC 15847↗(opens in a new tab)
- Ensembl gene ENSG00000139194↗(opens in a new tab)
- NCBI Gene 83758↗(opens in a new tab)
Summary
- Cytogenetic location
- 12p13.31
- Coordinates
- Chromosome 12: 7,123,686–7,128,889 (GRCh38)
- Exons
- 4 exons across 5.2 kb
- Protein
- 135 amino acids
- Also known as
- CRBPIII, CRBP3, CRBP-III
- MANE Select transcript
- ENST00000266560.8NM_031491.4
- Locus type
- Protein-coding
- Very high
- Confident
- Low
- Very low
This page as data
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How RBP5 is laid out
- Coding sequence
- Untranslated region
- Intron
- Direction of transcription
- Stretches short reads find hard
Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.
Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).
Nearby genes from Ensembl release 116, on GRCh38.
Exons make up 1 kb of the gene's 5.2 kb; 408 of those bases code for the protein.
Sequencing RBP5
0Low
How hard RBP5 is to sequence with short reads, out of 100Each bar is the share of RBP5's exon bases in that kind of difficult region. The score weighs them by how much each costs a short-read call: 0 when no base is in any, 100 when every base is in all of them.
- MappabilityStretches where 100 or 250 bp reads cannot be placed uniquely, so a call there may be missing or wrong. Weight 35%.0%
- HomologySegmental duplications: copies elsewhere in the genome, such as paralogues and pseudogenes, at 90% identity or more. Weight 30%.0%
- RepeatsTandem repeats and runs of one base, which reads slip on and may not span. Weight 15%.0%
- GC contentWindows under 25% or over 65% G and C, which library preparation covers thinly. Weight 10%.0%
- Reference coverageGaps in the reference assembly nearby, where there is no sequence for reads to align to. Weight 10%.0%
External links
Gene records
Transcript
Protein
Where this comes from
- HGNC: the gene's symbol, name, other symbols and location.
- MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
- The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.
Cite this page
Dante Labs. (n.d.). RBP5 gene: retinol binding protein 5. Retrieved 17 October 2026, from https://dantelabs.com/genes/rbp5
Dante Labs. RBP5 gene: retinol binding protein 5 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/rbp5
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