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Gene

NYNRIN

NYN domain and retroviral integrase containing

Summary

Cytogenetic location
14q12
Coordinates
Chromosome 14: 24,399,003–24,419,283 (GRCh38)
Exons
9 exons across 20.3 kb
Protein
1,898 amino acids
Also known as
FLJ11811, CGIN1
Previous symbols
KIAA1305
MANE Select transcript
ENST00000382554.4NM_025081.3
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads NYNRIN yet. The test sequences your whole genome, so your data includes it all the same.

How NYNRIN is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 14, with a bracket where NYNRIN sits. NYNRIN and 45 genes near it on chromosome 14, from 23,909,143 to 24,909,142.Chromosome 1414q12p13p12p11.2p11.1q11.1q11.2q12q13.1q13.2q13.3q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q31.1q31.2q31.3q32.11q32.12q32.13q32.2q32.31q32.32q32.3324 Mb24.2 Mb24.4 Mb24.6 Mb24.8 MbDHRS4: 23,953,713–23,969,279, forward strandDHRS4DHRS4L2: 23,969,874–24,006,408, forward strandDHRS4L2CARMIL3: 24,051,387–24,069,734, forward strandCARMIL3CPNE6: 24,070,837–24,078,100, forward strandCPNE6NRL: 24,078,662–24,115,026, reverse strandPCK2: 24,094,053–24,110,598, forward strandPCK2DCAF11: 24,114,010–24,125,615, forward strand: 24,120,956–24,131,829, forward strandFITM1: 24,130,659–24,132,849, forward strandPSME1: 24,136,142–24,138,967, forward strandEMC9: 24,138,958–24,142,023, reverse strandEMC9PSME2: 24,143,360–24,147,570, reverse strandRNF31: 24,146,683–24,160,660, forward strandRNF31: 24,147,548–24,166,452, forward strandIRF9: 24,161,101–24,168,043, forward strandREC8: 24,171,853–24,180,923, forward strandIPO4: 24,180,043–24,188,990, reverse strandIPO4: 24,180,395–24,190,416, reverse strandTM9SF1: 24,189,140–24,196,287, reverse strand: 24,189,157–24,213,473, reverse strandTSSK4: 24,205,696–24,208,362, forward strandCHMP4A: 24,209,581–24,213,830, reverse strandMDP1: 24,213,939–24,216,070, reverse strandNEDD8-MDP1: 24,213,955–24,232,352, reverse strandNEDD8: 24,216,802–24,232,539, reverse strandNEDD8GMPR2: 24,232,211–24,239,246, forward strandGMPR2TINF2: 24,234,009–24,242,666, reverse strandTINF2TGM1: 24,249,114–24,264,432, reverse strandTGM1RABGGTA: 24,265,468–24,271,620, reverse strandDHRS1: 24,290,594–24,300,136, reverse strandNOP9: 24,299,825–24,309,124, forward strandCIDEB: 24,305,187–24,311,454, reverse strandLTB4R2: 24,305,734–24,312,053, forward strandLTB4R2LTB4R: 24,311,188–24,318,036, forward strandLTB4RADCY4: 24,318,091–24,335,208, reverse strandADCY4RIPK3: 24,336,025–24,340,022, reverse strandRIPK3NFATC4: 24,365,673–24,379,613, forward strandNFATC4NYNRIN: 24,399,003–24,419,283, forward strandNYNRINKHNYN: 24,423,052–24,441,846, forward strandKHNYNCBLN3: 24,423,886–24,430,972, reverse strandCBLN3SDR39U1: 24,439,651–24,442,905, reverse strandSDR39U1CMA1: 24,505,353–24,508,271, reverse strandCMA1CTSG: 24,573,518–24,576,250, reverse strandCTSGGZMH: 24,606,480–24,609,821, reverse strandGZMHGZMB: 24,630,954–24,634,277, reverse strandGZMBSTXBP6: 24,809,454–25,050,333, reverse strandSTXBP6Diagram of NYNRIN: 9 exons on the forward strand of chromosome 14Exon 1: 24,399,003–24,399,086, 84 basesExon 2: 24,399,230–24,399,444, 215 basesExon 3: 24,407,869–24,408,527, 659 basesExon 4: 24,408,652–24,410,208, 1,557 basesExon 5: 24,411,076–24,411,206, 131 basesExon 6: 24,411,354–24,411,450, 97 basesExon 7: 24,412,997–24,413,098, 102 basesExon 8: 24,413,316–24,413,417, 102 basesExon 9: 24,414,596–24,419,283, 4,688 bases1595′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 7.6 kb of the gene's 20.3 kb; 5,697 of those bases code for the protein.

Sequencing NYNRIN

3Easy

How hard NYNRIN is to sequence with short reads, out of 100

Almost all of NYNRIN's exons sit where short reads map cleanly.

What adds to it: the share of NYNRIN's exons in each kind of hard region

  • Mappability0%
  • Homology0%
  • Shared with chrY0%
  • Reference coverage0%
  • Repeats2.4%
  • GC content12%

A Dante Labs score from our own research, built on NIST's Genome in a Bottle maps of hard-to-sequence regions.How it's scored

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). NYNRIN gene: NYN domain and retroviral integrase containing. Retrieved 19 October 2026, from https://dantelabs.com/genes/nynrin

Vancouver

Dante Labs. NYNRIN gene: NYN domain and retroviral integrase containing [Internet]. [cited 19 October 2026]. Available from: https://dantelabs.com/genes/nynrin

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