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Gene

MBD3

methyl-CpG binding domain protein 3

Summary

Cytogenetic location
19p13.3
Coordinates
Chromosome 19: 1,573,596–1,592,865 (GRCh38)
Exons
7 exons across 19.3 kb
Protein
291 amino acids
MANE Select transcript
ENST00000434436.8NM_001281453.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads MBD3 yet. The test sequences your whole genome, so your data includes it all the same.

How MBD3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 19, with a bracket where MBD3 sits. MBD3 and 38 genes near it on chromosome 19, from 1,083,231 to 2,083,230.Chromosome 1919p13.3p13.3p13.2p13.13p13.12p13.11p12p11q11q12q13.11q13.12q13.13q13.2q13.31q13.32q13.33q13.41q13.42q13.431.2 Mb1.4 Mb1.6 Mb1.8 Mb2 MbARHGAP45: 1,065,923–1,087,829, forward strandARHGAP45POLR2E: 1,085,104–1,095,486, reverse strandPOLR2EGPX4: 1,103,982–1,106,791, forward strandGPX4SBNO2: 1,107,634–1,174,295, reverse strandSBNO2STK11: 1,177,558–1,228,431, forward strandSTK11CBARP: 1,228,282–1,239,465, reverse strandATP5F1D: 1,241,734–1,244,828, forward strandMIDN: 1,248,316–1,259,145, forward strandCIRBP: 1,259,384–1,274,880, forward strandCIRBPFAM174C: 1,275,509–1,279,244, forward strandFAM174CFAM174C: 1,276,021–1,279,244, forward strandFAM174CEFNA2: 1,285,873–1,301,431, forward strandEFNA2PWWP3A: 1,354,293–1,378,434, forward strandPWWP3ANDUFS7: 1,383,527–1,395,590, forward strandNDUFS7GAMT: 1,397,026–1,401,731, reverse strandGAMTDAZAP1: 1,407,533–1,435,687, forward strandDAZAP1RPS15: 1,438,149–1,440,508, forward strandRPS15APC2: 1,446,302–1,473,244, forward strandC19orf25: 1,461,143–1,479,565, reverse strandPCSK4: 1,481,428–1,490,752, reverse strandPCSK4REEP6: 1,491,016–1,497,928, forward strandREEP6ADAMTSL5: 1,503,045–1,513,604, reverse strandADAMTSL5PLK5: 1,507,978–1,536,046, forward strandPLK5MEX3D: 1,554,672–1,568,352, reverse strandMEX3DMBD3: 1,573,596–1,592,865, reverse strandMBD3: 1,578,339–1,605,445, reverse strandUQCR11: 1,593,987–1,605,500, reverse strandUQCR11TCF3: 1,609,291–1,652,911, reverse strandTCF3ONECUT3: 1,753,506–1,780,988, forward strandONECUT3ATP8B3: 1,781,761–1,812,295, reverse strandATP8B3REXO1: 1,815,248–1,848,493, reverse strandREXO1KLF16: 1,852,399–1,863,919, reverse strandKLF16ABHD17A: 1,876,810–1,885,618, reverse strandABHD17AADAT3: 1,905,214–1,913,448, forward strandADAT3SCAMP4: 1,905,214–1,926,013, forward strandSCAMP4CSNK1G2: 1,940,915–1,981,339, forward strandCSNK1G2BTBD2: 1,985,438–2,034,881, reverse strandBTBD2MKNK2: 2,037,465–2,061,220, reverse strandMKNK2MOB3A: 2,071,014–2,096,679, reverse strandMOB3ADiagram of MBD3: 7 exons on the reverse strand of chromosome 19Exon 7: 1,573,596–1,578,158, 4,563 basesExon 6: 1,578,335–1,578,538, 204 basesExon 5: 1,581,092–1,581,269, 178 basesExon 4: 1,582,622–1,582,712, 91 basesExon 3: 1,584,540–1,584,677, 138 basesExon 2: 1,585,055–1,585,214, 160 basesExon 1: 1,592,522–1,592,865, 344 bases76543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 5.7 kb of the gene's 19.3 kb; 876 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). MBD3 gene: methyl-CpG binding domain protein 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/mbd3

Vancouver

Dante Labs. MBD3 gene: methyl-CpG binding domain protein 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/mbd3

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