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Gene

FOXN4

forkhead box N4

Summary

Cytogenetic location
12q24.11
Coordinates
Chromosome 12: 109,277,978–109,309,284 (GRCh38)
Exons
10 exons across 31.3 kb
Protein
517 amino acids
MANE Select transcript
ENST00000299162.10NM_213596.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads FOXN4 yet. The test sequences your whole genome, so your data includes it all the same.

How FOXN4 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where FOXN4 sits. FOXN4 and 14 genes near it on chromosome 12, from 108,793,631 to 109,793,630.Chromosome 1212q24.11p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.33108.8 Mb109 Mb109.2 Mb109.4 Mb109.6 MbSSH1: 108,778,191–108,857,637, reverse strandSSH1DAO: 108,858,932–108,901,052, forward strandDAOSVOP: 108,907,741–109,021,068, reverse strandSVOPUSP30: 109,023,089–109,088,023, forward strandUSP30ALKBH2: 109,085,154–109,098,462, reverse strandALKBH2UNG: 109,097,569–109,126,725, forward strandUNGACACB: 109,116,320–109,268,226, forward strandACACBFOXN4: 109,277,978–109,309,284, reverse strandFOXN4MYO1H: 109,347,900–109,455,523, forward strandMYO1HKCTD10: 109,448,655–109,477,359, reverse strandKCTD10UBE3B: 109,477,375–109,536,705, forward strandUBE3BMMAB: 109,553,715–109,573,580, reverse strandMMABMVK: 109,573,255–109,600,609, forward strandMVKFAM222A: 109,713,819–109,770,495, forward strandFAM222ATRPV4: 109,783,087–109,833,542, reverse strandTRPV4Diagram of FOXN4: 10 exons on the reverse strand of chromosome 12Exon 10: 109,277,978–109,279,930, 1,953 basesExon 9: 109,281,407–109,281,799, 393 basesExon 8: 109,285,304–109,285,511, 208 basesExon 7: 109,286,648–109,286,744, 97 basesExon 6: 109,287,397–109,287,524, 128 basesExon 5: 109,287,844–109,287,954, 111 basesExon 4: 109,288,056–109,288,180, 125 basesExon 3: 109,290,141–109,290,286, 146 basesExon 2: 109,308,236–109,308,324, 89 basesExon 1: 109,309,119–109,309,284, 166 bases10864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.4 kb of the gene's 31.3 kb; 1,554 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). FOXN4 gene: forkhead box N4. Retrieved 17 October 2026, from https://dantelabs.com/genes/foxn4

Vancouver

Dante Labs. FOXN4 gene: forkhead box N4 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/foxn4

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