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Gene

ATG16L2

autophagy related 16 like 2

Summary

Cytogenetic location
11q13.4
Coordinates
Chromosome 11: 72,814,411–72,829,635 (GRCh38)
Exons
18 exons across 15.2 kb
Protein
619 amino acids
Also known as
FLJ00012, WDR80, ATG16B
MANE Select transcript
ENST00000321297.10NM_033388.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads ATG16L2 yet. The test sequences your whole genome, so your data includes it all the same.

How ATG16L2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 11, with a bracket where ATG16L2 sits. ATG16L2 and 8 genes near it on chromosome 11, from 72,322,023 to 73,322,022.Chromosome 1111q13.4p15.5p15.4p15.3p15.2p15.1p14.3p14.2p14.1p13p12p11.2p11.12p11.11q11q12.1q12.2q12.3q13.1q13.2q13.3q13.4q13.5q14.1q14.2q14.3q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q2572.4 Mb72.6 Mb72.8 Mb73 Mb73.2 MbCLPB: 72,285,495–72,434,680, reverse strandCLPBPDE2A: 72,576,141–72,674,591, reverse strandPDE2AARAP1: 72,682,436–72,794,047, reverse strandARAP1STARD10: 72,753,216–72,794,047, reverse strandSTARD10ATG16L2: 72,814,411–72,829,635, forward strandATG16L2FCHSD2: 72,836,042–73,142,485, reverse strandFCHSD2P2RY2: 73,216,664–73,242,427, forward strandP2RY2P2RY6: 73,264,498–73,305,103, forward strandP2RY6ARHGEF17: 73,308,276–73,370,786, forward strandARHGEF17Diagram of ATG16L2: 18 exons on the forward strand of chromosome 11Exon 1: 72,814,411–72,814,563, 153 basesExon 2: 72,816,728–72,816,827, 100 basesExon 3: 72,817,756–72,817,855, 100 basesExon 4: 72,821,668–72,821,741, 74 basesExon 5: 72,822,044–72,822,295, 252 basesExon 6: 72,822,478–72,822,543, 66 basesExon 7: 72,822,848–72,822,961, 114 basesExon 8: 72,824,060–72,824,122, 63 basesExon 9: 72,824,734–72,824,842, 109 basesExon 10: 72,825,302–72,825,407, 106 basesExon 11: 72,826,173–72,826,243, 71 basesExon 12: 72,826,518–72,826,589, 72 basesExon 13: 72,826,703–72,826,823, 121 basesExon 14: 72,827,188–72,827,293, 106 basesExon 15: 72,828,359–72,828,508, 150 basesExon 16: 72,828,729–72,828,776, 48 basesExon 17: 72,828,883–72,828,984, 102 basesExon 18: 72,829,303–72,829,635, 333 bases1246810121416185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.1 kb of the gene's 15.2 kb; 1,860 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). ATG16L2 gene: autophagy related 16 like 2. Retrieved 16 October 2026, from https://dantelabs.com/genes/atg16l2

Vancouver

Dante Labs. ATG16L2 gene: autophagy related 16 like 2 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/atg16l2

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