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Gene

SYF2

SYF2 pre-mRNA splicing factor

Summary

Cytogenetic location
1p36.11
Coordinates
Chromosome 1: 25,222,276–25,232,502 (GRCh38)
Exons
7 exons across 10.2 kb
Protein
243 amino acids
Also known as
p29, DKFZp564O2082, NTC31, fSAP29
Previous symbols
CBPIN
MANE Select transcript
ENST00000236273.9NM_015484.5
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads SYF2 yet. The test sequences your whole genome, so your data includes it all the same.

How SYF2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where SYF2 sits. SYF2 and 9 genes near it on chromosome 1, from 24,727,389 to 25,727,388.Chromosome 11p36.11p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q4424.8 Mb25 Mb25.2 Mb25.4 Mb25.6 MbCLIC4: 24,745,342–24,844,324, forward strandCLIC4RUNX3: 24,899,511–24,965,121, reverse strandRUNX3SYF2: 25,222,276–25,232,502, reverse strandSYF2RSRP1: 25,242,248–25,338,244, reverse strandRSRP1RHD: 25,272,393–25,330,445, forward strandRHDTMEM50A: 25,337,915–25,362,362, forward strandTMEM50ARHCE: 25,362,249–25,430,192, reverse strandRHCEMACO1: 25,430,853–25,500,209, forward strandMACO1LDLRAP1: 25,543,550–25,591,296, forward strandLDLRAP1MAN1C1: 25,616,788–25,786,206, forward strandMAN1C1Diagram of SYF2: 7 exons on the reverse strand of chromosome 1Exon 7: 25,222,276–25,223,431, 1,156 basesExon 6: 25,225,002–25,225,100, 99 basesExon 5: 25,227,442–25,227,532, 91 basesExon 4: 25,228,118–25,228,235, 118 basesExon 3: 25,228,998–25,229,123, 126 basesExon 2: 25,232,104–25,232,211, 108 basesExon 1: 25,232,444–25,232,502, 59 bases76543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.8 kb of the gene's 10.2 kb; 732 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SYF2 gene: SYF2 pre-mRNA splicing factor. Retrieved 17 October 2026, from https://dantelabs.com/genes/syf2

Vancouver

Dante Labs. SYF2 gene: SYF2 pre-mRNA splicing factor [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/syf2

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