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Gene

SNX9

sorting nexin 9

Summary

Cytogenetic location
6q25.3
Coordinates
Chromosome 6: 157,823,246–157,945,077 (GRCh38)
Exons
18 exons across 121.8 kb
Protein
595 amino acids
Also known as
SH3PX1, SDP1, SH3PXD3A
MANE Select transcript
ENST00000392185.8NM_016224.5
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads SNX9 yet. The test sequences your whole genome, so your data includes it all the same.

How SNX9 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 6, with a bracket where SNX9 sits. SNX9 and 5 genes near it on chromosome 6, from 157,384,162 to 158,384,161.Chromosome 66q25.3p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q27157.4 Mb157.6 Mb157.8 Mb158 Mb158.2 MbZDHHC14: 157,381,133–157,678,157, forward strandZDHHC14SNX9: 157,823,246–157,945,077, forward strandSNX9SYNJ2: 157,981,824–158,099,176, forward strandSYNJ2SERAC1: 158,109,515–158,168,295, reverse strandSERAC1GTF2H5: 158,167,749–158,199,344, forward strandGTF2H5TULP4: 158,232,236–158,511,828, forward strandTULP4Diagram of SNX9: 18 exons on the forward strand of chromosome 6Exon 1: 157,823,246–157,823,446, 201 basesExon 2: 157,867,547–157,867,633, 87 basesExon 3: 157,873,102–157,873,176, 75 basesExon 4: 157,875,051–157,875,176, 126 basesExon 5: 157,896,827–157,896,998, 172 basesExon 6: 157,901,898–157,902,045, 148 basesExon 7: 157,906,128–157,906,212, 85 basesExon 8: 157,909,665–157,909,790, 126 basesExon 9: 157,909,908–157,910,025, 118 basesExon 10: 157,921,531–157,921,661, 131 basesExon 11: 157,927,111–157,927,214, 104 basesExon 12: 157,928,599–157,928,702, 104 basesExon 13: 157,932,195–157,932,272, 78 basesExon 14: 157,935,964–157,936,040, 77 basesExon 15: 157,937,434–157,937,523, 90 basesExon 16: 157,938,633–157,938,747, 115 basesExon 17: 157,940,883–157,940,974, 92 basesExon 18: 157,942,791–157,945,077, 2,287 bases151015185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.2 kb of the gene's 121.8 kb; 1,788 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SNX9 gene: sorting nexin 9. Retrieved 17 October 2026, from https://dantelabs.com/genes/snx9

Vancouver

Dante Labs. SNX9 gene: sorting nexin 9 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/snx9

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