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Gene

SMCO1

single-pass membrane protein with coiled-coil domains 1

Summary

Cytogenetic location
3q29
Coordinates
Chromosome 3: 196,506,879–196,515,346 (GRCh38)
Exons
3 exons across 8.5 kb
Protein
214 amino acids
Also known as
FLJ41923, DKFZp313B0440
Previous symbols
C3orf43
MANE Select transcript
ENST00000397537.3NM_001077657.3
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SMCO1 yet. The test sequences your whole genome, so your data includes it all the same.

How SMCO1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 3, with a bracket where SMCO1 sits. SMCO1 and 21 genes near it on chromosome 3, from 196,011,113 to 197,011,112.Chromosome 33q29p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q29196.2 Mb196.4 Mb196.6 Mb196.8 Mb197 MbTFRC: 196,012,511–196,082,162, reverse strandTFRCZDHHC19: 196,197,452–196,211,437, reverse strandZDHHC19SLC51A: 196,211,487–196,244,766, forward strandSLC51APCYT1A: 196,214,222–196,287,957, reverse strandPCYT1A: 196,248,230–196,318,222, reverse strandDYNLT2B: 196,291,219–196,318,328, reverse strandDYNLT2BTM4SF19-DYNLT2B: 196,316,082–196,338,373, reverse strandTM4SF19-DYNLT2BTM4SF19: 196,319,342–196,338,604, reverse strandTM4SF19UBXN7: 196,347,659–196,432,476, reverse strandUBXN7RNF168: 196,468,783–196,503,824, reverse strandRNF168SMCO1: 196,506,879–196,515,346, reverse strandSMCO1WDR53: 196,552,217–196,569,263, reverse strandWDR53FBXO45: 196,568,611–196,589,059, forward strandFBXO45NRROS: 196,639,676–196,707,522, forward strandNRROSPIGX: 196,639,775–196,736,016, forward strandPIGXCEP19: 196,706,268–196,712,603, reverse strandCEP19PAK2: 196,739,743–196,832,647, forward strandPAK2SENP5: 196,867,856–196,934,718, forward strandSENP5NCBP2: 196,935,402–196,942,594, reverse strandNCBP2NCBP2AS2: 196,942,674–196,943,543, forward strandNCBP2AS2PIGZ: 196,946,344–196,969,060, reverse strandPIGZMELTF: 196,980,590–197,029,874, reverse strandMELTFDiagram of SMCO1: 3 exons on the reverse strand of chromosome 3Exon 3: 196,506,879–196,508,331, 1,453 basesExon 2: 196,509,520–196,509,669, 150 basesExon 1: 196,515,160–196,515,346, 187 bases3215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.8 kb of the gene's 8.5 kb; 645 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SMCO1 gene: single-pass membrane protein with coiled-coil domains 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/smco1

Vancouver

Dante Labs. SMCO1 gene: single-pass membrane protein with coiled-coil domains 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/smco1

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