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Gene

SH2D3A

SH2 domain containing 3A

Summary

Cytogenetic location
19p13.3
Coordinates
Chromosome 19: 6,752,160–6,767,435 (GRCh38)
Exons
10 exons across 15.3 kb
Protein
576 amino acids
Also known as
NSP1
MANE Select transcript
ENST00000245908.11NM_005490.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SH2D3A yet. The test sequences your whole genome, so your data includes it all the same.

How SH2D3A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 19, with a bracket where SH2D3A sits. SH2D3A and 27 genes near it on chromosome 19, from 6,259,798 to 7,259,797.Chromosome 1919p13.3p13.3p13.2p13.13p13.12p13.11p12p11q11q12q13.11q13.12q13.13q13.2q13.31q13.32q13.33q13.41q13.42q13.436.4 Mb6.6 Mb6.8 Mb7 Mb7.2 MbMLLT1: 6,210,377–6,280,029, reverse strandMLLT1ACER1: 6,306,030–6,333,612, reverse strandACER1CLPP: 6,361,427–6,370,242, forward strandCLPPALKBH7: 6,372,715–6,377,261, forward strandALKBH7PSPN: 6,375,148–6,379,058, reverse strandPSPNGTF2F1: 6,379,545–6,393,981, reverse strandGTF2F1KHSRP: 6,413,102–6,424,824, reverse strandKHSRPSLC25A41: 6,426,037–6,433,779, reverse strandSLC25A23: 6,436,068–6,465,203, reverse strandSLC25A23CRB3: 6,463,777–6,467,239, forward strandCRB3DENND1C: 6,467,207–6,482,557, reverse strandDENND1CTUBB4A: 6,494,308–6,502,848, reverse strandTUBB4ATNFSF9: 6,530,985–6,535,926, forward strandTNFSF9CD70: 6,583,183–6,604,103, reverse strandCD70TNFSF14: 6,658,085–6,670,621, reverse strandTNFSF14C3: 6,677,704–6,730,562, reverse strandC3GPR108: 6,729,914–6,737,665, reverse strandGPR108TRIP10: 6,737,925–6,751,530, forward strandTRIP10SH2D3A: 6,752,160–6,767,435, reverse strandSH2D3AVAV1: 6,772,676–6,857,366, forward strandVAV1ADGRE1: 6,887,530–6,940,459, forward strandADGRE1MBD3L2B: 7,018,969–7,021,431, reverse strandMBD3L2BMBD3L5: 7,030,578–7,033,011, forward strandMBD3L5MBD3L4: 7,037,749–7,040,179, reverse strandMBD3L4MBD3L2: 7,049,321–7,051,735, forward strandMBD3L2MBD3L3: 7,056,207–7,069,665, reverse strandZNF557: 7,069,416–7,096,206, forward strandINSR: 7,112,255–7,294,443, reverse strandINSRDiagram of SH2D3A: 10 exons on the reverse strand of chromosome 19Exon 10: 6,752,160–6,752,753, 594 basesExon 9: 6,753,456–6,753,641, 186 basesExon 8: 6,754,052–6,754,163, 112 basesExon 7: 6,754,251–6,754,425, 175 basesExon 6: 6,754,616–6,754,731, 116 basesExon 5: 6,754,831–6,755,315, 485 basesExon 4: 6,759,594–6,759,670, 77 basesExon 3: 6,760,638–6,760,987, 350 basesExon 2: 6,763,680–6,763,816, 137 basesExon 1: 6,767,387–6,767,435, 49 bases10864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.3 kb of the gene's 15.3 kb; 1,731 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SH2D3A gene: SH2 domain containing 3A. Retrieved 17 October 2026, from https://dantelabs.com/genes/sh2d3a

Vancouver

Dante Labs. SH2D3A gene: SH2 domain containing 3A [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/sh2d3a

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