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Gene

RTCA

RNA 3'-terminal phosphate cyclase

Summary

Cytogenetic location
1p21.2
Coordinates
Chromosome 1: 100,266,216–100,292,769 (GRCh38)
Exons
11 exons across 26.6 kb
Protein
366 amino acids
Also known as
RPC, RTC1
Previous symbols
RTCD1
MANE Select transcript
ENST00000370128.9NM_003729.4
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads RTCA yet. The test sequences your whole genome, so your data includes it all the same.

How RTCA is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where RTCA sits. RTCA and 11 genes near it on chromosome 1, from 99,779,493 to 100,779,492.Chromosome 11p21.2p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q4499.8 Mb100 Mb100.2 Mb100.4 Mb100.6 MbAGL: 99,849,777–99,924,427, forward strandAGLSLC35A3: 99,969,351–100,035,634, forward strandSLC35A3: 99,970,011–100,083,321, forward strandSLC71A1: 100,038,076–100,083,948, forward strandSLC71A1SASS6: 100,083,563–100,132,955, reverse strandSASS6TRMT13: 100,133,043–100,151,150, forward strandTRMT13LRRC39: 100,146,522–100,178,306, reverse strandLRRC39DBT: 100,182,222–100,249,873, reverse strandDBTRTCA: 100,266,216–100,292,769, forward strandRTCACDC14A: 100,325,629–100,520,564, forward strandCDC14AGPR88: 100,538,105–100,542,021, forward strandGPR88VCAM1: 100,719,684–100,739,045, forward strandVCAM1Diagram of RTCA: 11 exons on the forward strand of chromosome 1Exon 1: 100,266,216–100,266,420, 205 basesExon 2: 100,266,524–100,266,624, 101 basesExon 3: 100,268,152–100,268,295, 144 basesExon 4: 100,270,557–100,270,680, 124 basesExon 5: 100,273,394–100,273,452, 59 basesExon 6: 100,274,824–100,274,965, 142 basesExon 7: 100,275,599–100,275,723, 125 basesExon 8: 100,277,258–100,277,316, 59 basesExon 9: 100,285,228–100,285,322, 95 basesExon 10: 100,287,099–100,287,203, 105 basesExon 11: 100,291,403–100,292,769, 1,367 bases1510115′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.5 kb of the gene's 26.6 kb; 1,101 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). RTCA gene: RNA 3'-terminal phosphate cyclase. Retrieved 17 October 2026, from https://dantelabs.com/genes/rtca

Vancouver

Dante Labs. RTCA gene: RNA 3'-terminal phosphate cyclase [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/rtca

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