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Gene

RNU5E-1

RNA, U5E small nuclear 1

Summary

Cytogenetic location
1p36.22
Coordinates
Chromosome 1: 11,908,152–11,908,272 (GRCh38)
Exons
1 exon across 0.1 kb
Also known as
U5E
Previous symbols
RNU5E
MANE Select transcript
ENST00000362477.2NR_002754.3
Locus type
Small nuclear RNA (snRNA)

Curated reports relevant to this gene

No Genome Test report reads RNU5E-1 yet. The test sequences your whole genome, so your data includes it all the same.

How RNU5E-1 is laid out

  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 1, with a bracket where RNU5E-1 sits. RNU5E-1 and 19 genes near it on chromosome 1, from 11,408,212 to 12,408,211.Chromosome 11p36.22p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q4411.6 Mb11.8 Mb12 Mb12.2 Mb12.4 MbDISP3: 11,478,905–11,537,583, forward strandDISP3FBXO2: 11,637,018–11,655,785, reverse strandFBXO2FBXO44: 11,650,618–11,663,327, forward strandFBXO44MAD2L2: 11,657,230–11,692,605, reverse strandMAD2L2FBXO6: 11,664,141–11,674,354, forward strandFBXO6DRAXIN: 11,690,958–11,725,857, forward strandDRAXINAGTRAP: 11,736,070–11,754,802, forward strandAGTRAPC1orf167: 11,761,787–11,789,585, forward strandC1orf167MTHFR: 11,785,723–11,806,455, reverse strandMTHFRCLCN6: 11,806,096–11,848,080, forward strandCLCN6NPPA: 11,845,701–11,848,345, reverse strandNPPANPPB: 11,857,454–11,859,648, reverse strandNPPBRNU5E-1: 11,908,152–11,908,272, forward strandRNU5E-1KIAA2013: 11,919,590–11,926,428, reverse strandKIAA2013PLOD1: 11,934,205–11,975,542, forward strandPLOD1MFN2: 11,980,181–12,015,211, forward strandMFN2MIIP: 12,019,466–12,032,048, forward strandMIIPTNFRSF8: 12,063,079–12,144,221, forward strandTNFRSF8TNFRSF1B: 12,166,970–12,209,228, forward strandTNFRSF1BVPS13D: 12,230,007–12,512,047, forward strandVPS13DDiagram of RNU5E-1: one exon on the forward strand of chromosome 1Exon 1: 11,908,152–11,908,272, 121 bases15′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 0.1 kb of the gene's 0.1 kb.

Sequencing RNU5E-1

0Low

How hard RNU5E-1 is to sequence with short reads, out of 100

  • Mappability0%
  • Homology0%
  • Repeats0%
  • GC content0%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). RNU5E-1 gene: RNA, U5E small nuclear 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/rnu5e-1

Vancouver

Dante Labs. RNU5E-1 gene: RNA, U5E small nuclear 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/rnu5e-1

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