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Gene

RNU1-1

RNA, U1 small nuclear 1

Summary

Cytogenetic location
1p36.13
Coordinates
Chromosome 1: 16,514,122–16,514,285 (GRCh38)
Exons
1 exon across 0.2 kb
Also known as
Rnu1a1, U1, HU1-1, U1A1, HSD1
Previous symbols
RNU1, RNU1G4, RNU1A3, RNU1A
MANE Select transcript
ENST00000383925.1NR_004430.4
Locus type
Small nuclear RNA (snRNA)

Curated reports relevant to this gene

No Genome Test report reads RNU1-1 yet. The test sequences your whole genome, so your data includes it all the same.

How RNU1-1 is laid out

  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where RNU1-1 sits. RNU1-1 and 16 genes near it on chromosome 1, from 16,014,204 to 17,014,203.Chromosome 11p36.13p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q4416.2 Mb16.4 Mb16.6 Mb16.8 Mb17 MbHSPB7: 16,014,018–16,020,597, reverse strandHSPB7CLCNKA: 16,018,146–16,034,109, forward strandCLCNKACLCNKB: 16,040,252–16,057,367, forward strandCLCNKBFAM131C: 16,057,769–16,073,664, reverse strandFAM131CEPHA2: 16,124,337–16,156,141, reverse strandEPHA2ARHGEF19: 16,197,854–16,212,893, reverse strandARHGEF19CPLANE2: 16,231,692–16,237,214, reverse strandCPLANE2FBXO42: 16,246,840–16,352,494, reverse strandFBXO42SZRD1: 16,352,575–16,398,147, forward strandSZRD1SPATA21: 16,387,117–16,437,424, reverse strandSPATA21NECAP2: 16,440,664–16,460,092, forward strandNECAP2RNU1-1: 16,514,122–16,514,285, reverse strandRNU1-1NBPF1: 16,562,319–16,613,562, reverse strandNBPF1CROCC: 16,740,273–16,972,964, forward strandCROCCMFAP2: 16,972,933–16,981,616, reverse strandMFAP2ATP13A2: 16,985,958–17,011,986, reverse strandATP13A2: 17,005,068–17,011,757, reverse strandDiagram of RNU1-1: one exon on the reverse strand of chromosome 1Exon 1: 16,514,122–16,514,285, 164 bases15′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 0.2 kb of the gene's 0.2 kb.

Sequencing RNU1-1

65High

How hard RNU1-1 is to sequence with short reads, out of 100

  • Mappability100%
  • Homology100%
  • Repeats0%
  • GC content0%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). RNU1-1 gene: RNA, U1 small nuclear 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/rnu1-1

Vancouver

Dante Labs. RNU1-1 gene: RNA, U1 small nuclear 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/rnu1-1

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