Skip to content
Use your HSA or FSA funds

Gene

PHF5A

PHD finger protein 5A

Summary

Cytogenetic location
22q13.2
Coordinates
Chromosome 22: 41,459,717–41,468,692 (GRCh38)
Exons
4 exons across 9 kb
Protein
110 amino acids
Also known as
MGC1346, SF3b14b, INI, bK223H9.2, Rds3, SAP14b, SF3B7
MANE Select transcript
ENST00000216252.4NM_032758.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PHF5A yet. The test sequences your whole genome, so your data includes it all the same.

How PHF5A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 22, with a bracket where PHF5A sits. PHF5A and 22 genes near it on chromosome 22, from 40,964,205 to 41,964,204.Chromosome 2222q13.2p13p12p11.2p11.1q11.1q11.21q11.22q11.23q12.1q12.2q12.3q13.1q13.2q13.31q13.32q13.3341 Mb41.2 Mb41.4 Mb41.6 Mb41.8 MbRBX1: 40,951,277–40,973,539, forward strandRBX1EP300: 41,091,816–41,180,077, forward strandEP300L3MBTL2: 41,205,282–41,231,623, forward strandL3MBTL2CHADL: 41,229,256–41,241,000, reverse strandCHADLRANGAP1: 41,243,474–41,302,744, reverse strandRANGAP1ZC3H7B: 41,301,457–41,360,155, forward strandZC3H7BTEF: 41,367,333–41,399,326, forward strandTEFTOB2: 41,433,489–41,447,602, reverse strandTOB2ACO2: 41,447,830–41,529,273, forward strandACO2PHF5A: 41,459,717–41,468,692, reverse strandPHF5APOLR3H: 41,525,799–41,544,606, reverse strandPOLR3HCSDC2: 41,560,758–41,577,741, forward strandCSDC2PMM1: 41,576,886–41,595,275, reverse strandPMM1DESI1: 41,598,028–41,621,089, reverse strandDESI1XRCC6: 41,620,786–41,664,087, forward strandXRCC6SNU13: 41,666,627–41,690,504, reverse strandSNU13MEI1: 41,699,494–41,799,456, forward strandMEI1CCDC134: 41,800,321–41,832,178, forward strandCCDC134SREBF2: 41,833,029–41,907,308, forward strandSREBF2SHISA8: 41,906,316–41,915,129, reverse strandSHISA8TNFRSF13C: 41,922,032–41,926,806, reverse strandTNFRSF13CCENPM: 41,927,514–41,947,183, reverse strandCENPMSMIM45: 41,947,178–41,958,942, forward strandSMIM45Diagram of PHF5A: 4 exons on the reverse strand of chromosome 22Exon 4: 41,459,717–41,460,487, 771 basesExon 3: 41,467,448–41,467,614, 167 basesExon 2: 41,468,124–41,468,147, 24 basesExon 1: 41,468,602–41,468,692, 91 bases43215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.1 kb of the gene's 9 kb; 333 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PHF5A gene: PHD finger protein 5A. Retrieved 17 October 2026, from https://dantelabs.com/genes/phf5a

Vancouver

Dante Labs. PHF5A gene: PHD finger protein 5A [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/phf5a

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test