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Gene

NT5M

5',3'-nucleotidase, mitochondrial

Summary

Cytogenetic location
17p11.2
Coordinates
Chromosome 17: 17,303,373–17,347,663 (GRCh38)
Exons
5 exons across 44.3 kb
Protein
228 amino acids
Also known as
dNT-2, dNT2, mdN
MANE Select transcript
ENST00000389022.9NM_020201.4
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads NT5M yet. The test sequences your whole genome, so your data includes it all the same.

How NT5M is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 17, with a bracket where NT5M sits. NT5M and 11 genes near it on chromosome 17, from 16,825,518 to 17,825,517.Chromosome 1717p11.2p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.317 Mb17.2 Mb17.4 Mb17.6 Mb17.8 MbTNFRSF13B: 16,929,816–16,972,118, reverse strandTNFRSF13BMPRIP: 17,042,381–17,217,679, forward strandMPRIPPLD6: 17,200,622–17,206,369, reverse strandPLD6: 17,202,649–17,237,185, reverse strandFLCN: 17,212,200–17,237,326, reverse strandFLCNCOPS3: 17,244,686–17,281,311, reverse strandCOPS3NT5M: 17,303,373–17,347,663, forward strandNT5MMED9: 17,476,981–17,494,484, forward strandMED9RASD1: 17,494,193–17,496,402, reverse strandRASD1PEMT: 17,505,559–17,592,105, reverse strandPEMTRAI1: 17,681,323–17,811,453, forward strandRAI1SREBF1: 17,810,399–17,837,035, reverse strandSREBF1Diagram of NT5M: 5 exons on the forward strand of chromosome 17Exon 1: 17,303,373–17,303,817, 445 basesExon 2: 17,306,543–17,306,643, 101 basesExon 3: 17,323,185–17,323,245, 61 basesExon 4: 17,344,794–17,344,908, 115 basesExon 5: 17,346,805–17,347,663, 859 bases123455′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.6 kb of the gene's 44.3 kb; 687 of those bases code for the protein.

Sequencing NT5M

7Low

How hard NT5M is to sequence with short reads, out of 100

  • Mappability0%
  • Homology0%
  • Repeats11%
  • GC content53%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). NT5M gene: 5',3'-nucleotidase, mitochondrial. Retrieved 17 October 2026, from https://dantelabs.com/genes/nt5m

Vancouver

Dante Labs. NT5M gene: 5',3'-nucleotidase, mitochondrial [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/nt5m

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