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Gene

NLRC3

NLR family CARD domain containing 3

Summary

Cytogenetic location
16p13.3
Coordinates
Chromosome 16: 3,539,033–3,577,403 (GRCh38)
Exons
20 exons across 38.4 kb
Protein
1,065 amino acids
Also known as
CLR16.2, FLJ00348, NOD3
MANE Select transcript
ENST00000359128.10NM_178844.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads NLRC3 yet. The test sequences your whole genome, so your data includes it all the same.

How NLRC3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 16, with a bracket where NLRC3 sits. NLRC3 and 24 genes near it on chromosome 16, from 3,058,218 to 4,058,217.Chromosome 1616p13.3p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.33.2 Mb3.4 Mb3.6 Mb3.8 Mb4 MbMMP25: 3,046,062–3,060,729, forward strandMMP25IL32: 3,064,301–3,082,192, forward strandIL32ZSCAN10: 3,088,888–3,099,370, reverse strandZSCAN10ZNF205: 3,112,550–3,120,527, forward strandZNF205ZNF213: 3,129,777–3,142,804, forward strandZNF213OR1F1: 3,188,204–3,224,779, forward strandOR1F1ZNF200: 3,222,324–3,236,221, reverse strandZNF200MEFV: 3,240,392–3,256,954, reverse strandMEFVZNF263: 3,263,800–3,301,705, forward strandZNF263TIGD7: 3,298,390–3,305,729, reverse strandTIGD7ZNF75A: 3,305,385–3,320,003, forward strandZNF75AOR2C1: 3,355,889–3,357,306, forward strandOR2C1: 3,365,099–3,479,550, forward strandZSCAN32: 3,382,081–3,401,483, reverse strandZSCAN32ZNF174: 3,401,194–3,409,478, forward strandZNF174ZNF597: 3,432,414–3,443,539, reverse strandZNF597NAA60: 3,443,623–3,486,961, forward strandNAA60C16orf90: 3,493,484–3,495,489, reverse strandC16orf90IFT38: 3,500,976–3,540,653, forward strandIFT38NLRC3: 3,539,033–3,577,403, reverse strandNLRC3SLX4: 3,579,654–3,611,617, reverse strandSLX4DNASE1: 3,611,678–3,680,143, forward strandDNASE1TRAP1: 3,651,639–3,717,595, reverse strandTRAP1CREBBP: 3,725,054–3,880,734, reverse strandCREBBPADCY9: 3,953,387–4,116,493, reverse strandADCY9Diagram of NLRC3: 20 exons on the reverse strand of chromosome 16Exon 20: 3,539,033–3,541,915, 2,883 basesExon 19: 3,542,191–3,542,274, 84 basesExon 18: 3,542,692–3,542,775, 84 basesExon 17: 3,543,425–3,543,508, 84 basesExon 16: 3,544,246–3,544,329, 84 basesExon 15: 3,548,135–3,548,218, 84 basesExon 14: 3,548,670–3,548,753, 84 basesExon 13: 3,549,142–3,549,225, 84 basesExon 12: 3,549,697–3,549,780, 84 basesExon 11: 3,550,414–3,550,497, 84 basesExon 10: 3,552,196–3,552,279, 84 basesExon 9: 3,554,242–3,554,325, 84 basesExon 8: 3,556,911–3,556,994, 84 basesExon 7: 3,557,593–3,557,676, 84 basesExon 6: 3,561,702–3,561,788, 87 basesExon 5: 3,563,009–3,564,758, 1,750 basesExon 4: 3,564,859–3,565,060, 202 basesExon 3: 3,565,319–3,565,380, 62 basesExon 2: 3,567,243–3,567,324, 82 basesExon 1: 3,577,149–3,577,403, 255 bases201816141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.4 kb of the gene's 38.4 kb; 3,198 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). NLRC3 gene: NLR family CARD domain containing 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/nlrc3

Vancouver

Dante Labs. NLRC3 gene: NLR family CARD domain containing 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/nlrc3

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