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Gene

LSM1

LSM1 homolog, mRNA degradation associated

Summary

Cytogenetic location
8p11.23
Coordinates
Chromosome 8: 38,163,339–38,176,493 (GRCh38)
Exons
4 exons across 13.2 kb
Protein
133 amino acids
Also known as
CASM, YJL124C
MANE Select transcript
ENST00000311351.9NM_014462.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads LSM1 yet. The test sequences your whole genome, so your data includes it all the same.

How LSM1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 8, with a bracket where LSM1 sits. LSM1 and 18 genes near it on chromosome 8, from 37,669,916 to 38,669,915.Chromosome 88p11.23p23.3p23.2p23.1p22p21.3p21.2p21.1p12p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q12.1q12.2q12.3q13.1q13.2q13.3q21.11q21.12q21.13q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.337.8 Mb38 Mb38.2 Mb38.4 Mb38.6 MbZNF703: 37,695,744–37,700,019, forward strandZNF703ERLIN2: 37,736,587–37,758,422, forward strandERLIN2PLPBP: 37,762,580–37,782,218, forward strandPLPBPADGRA2: 37,784,191–37,844,896, forward strandADGRA2BRF2: 37,843,268–37,849,911, reverse strandBRF2RAB11FIP1: 37,858,618–37,899,513, reverse strandRAB11FIP1GOT1L1: 37,934,281–37,940,162, reverse strandGOT1L1: 37,934,340–37,965,953, reverse strandADRB3: 37,962,990–37,966,614, reverse strandADRB3EIF4EBP1: 38,030,494–38,060,380, forward strandEIF4EBP1ASH2L: 38,105,493–38,144,124, forward strandASH2LSTAR: 38,138,571–38,151,102, reverse strandSTARLSM1: 38,163,339–38,176,493, reverse strandLSM1BAG4: 38,176,533–38,215,427, forward strandBAG4DDHD2: 38,225,218–38,283,357, forward strandDDHD2PLPP5: 38,263,095–38,269,519, reverse strandPLPP5NSD3: 38,269,704–38,383,021, reverse strandNSD3LETM2: 38,386,204–38,409,527, forward strandLETM2FGFR1: 38,400,215–38,468,834, reverse strandFGFR1Diagram of LSM1: 4 exons on the reverse strand of chromosome 8Exon 4: 38,163,339–38,163,840, 502 basesExon 3: 38,169,802–38,169,917, 116 basesExon 2: 38,171,965–38,172,033, 69 basesExon 1: 38,176,275–38,176,493, 219 bases43215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 0.9 kb of the gene's 13.2 kb; 402 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). LSM1 gene: LSM1 homolog, mRNA degradation associated. Retrieved 17 October 2026, from https://dantelabs.com/genes/lsm1

Vancouver

Dante Labs. LSM1 gene: LSM1 homolog, mRNA degradation associated [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/lsm1

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