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Gene

NSD3

nuclear receptor binding SET domain protein 3

Summary

Cytogenetic location
8p11.23
Coordinates
Chromosome 8: 38,269,704–38,382,271 (GRCh38)
Exons
24 exons across 112.6 kb
Protein
1,437 amino acids
Also known as
FLJ20353, WHISTLE, KMT3F
Previous symbols
WHSC1L1
MANE Select transcript
ENST00000317025.13NM_023034.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads NSD3 yet. The test sequences your whole genome, so your data includes it all the same.

How NSD3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 8, with a bracket where NSD3 sits. NSD3 and 16 genes near it on chromosome 8, from 37,825,988 to 38,825,987.Chromosome 88p11.23p23.3p23.2p23.1p22p21.3p21.2p21.1p12p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q12.1q12.2q12.3q13.1q13.2q13.3q21.11q21.12q21.13q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.338 Mb38.2 Mb38.4 Mb38.6 Mb38.8 MbADGRA2: 37,784,191–37,844,896, forward strandADGRA2BRF2: 37,843,268–37,849,911, reverse strandBRF2RAB11FIP1: 37,858,618–37,899,513, reverse strandRAB11FIP1GOT1L1: 37,934,281–37,940,162, reverse strandGOT1L1: 37,934,340–37,965,953, reverse strandADRB3: 37,962,990–37,966,614, reverse strandADRB3EIF4EBP1: 38,030,494–38,060,380, forward strandEIF4EBP1ASH2L: 38,105,493–38,144,124, forward strandASH2LSTAR: 38,138,571–38,151,102, reverse strandSTARLSM1: 38,161,436–38,176,730, reverse strandLSM1BAG4: 38,176,533–38,215,427, forward strandBAG4DDHD2: 38,225,218–38,283,357, forward strandDDHD2PLPP5: 38,263,095–38,269,519, reverse strandPLPP5NSD3: 38,269,704–38,382,271, reverse strandNSD3LETM2: 38,386,204–38,409,527, forward strandLETM2FGFR1: 38,400,215–38,468,834, reverse strandFGFR1TACC1: 38,728,157–38,853,028, forward strandTACC1Diagram of NSD3: 24 exons on the reverse strand of chromosome 8Exon 24: 38,269,704–38,275,882, 6,179 basesExon 23: 38,276,296–38,276,500, 205 basesExon 22: 38,278,306–38,278,412, 107 basesExon 21: 38,279,540–38,279,681, 142 basesExon 20: 38,281,467–38,281,583, 117 basesExon 19: 38,288,487–38,288,756, 270 basesExon 18: 38,289,393–38,289,505, 113 basesExon 17: 38,290,475–38,290,677, 203 basesExon 16: 38,295,796–38,295,952, 157 basesExon 15: 38,299,444–38,299,590, 147 basesExon 14: 38,304,587–38,304,757, 171 basesExon 13: 38,305,248–38,305,445, 198 basesExon 12: 38,314,647–38,314,773, 127 basesExon 11: 38,315,416–38,315,544, 129 basesExon 10: 38,315,912–38,316,042, 131 basesExon 9: 38,318,895–38,318,940, 46 basesExon 8: 38,321,072–38,321,172, 101 basesExon 7: 38,326,730–38,326,856, 127 basesExon 6: 38,329,378–38,329,893, 516 basesExon 5: 38,331,431–38,331,585, 155 basesExon 4: 38,337,305–38,337,467, 163 basesExon 3: 38,338,536–38,338,607, 72 basesExon 2: 38,347,497–38,348,215, 719 basesExon 1: 38,381,799–38,382,271, 473 bases24201510515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 10.8 kb of the gene's 112.6 kb; 4,314 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). NSD3 gene: nuclear receptor binding SET domain protein 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/nsd3

Vancouver

Dante Labs. NSD3 gene: nuclear receptor binding SET domain protein 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/nsd3

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