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Gene

LETMD1

LETM1 domain containing 1

Summary

Cytogenetic location
12q13.12
Coordinates
Chromosome 12: 51,048,327–51,060,424 (GRCh38)
Exons
9 exons across 12.1 kb
Protein
360 amino acids
Also known as
HCCR1, HCCR, HCCR-2, HCCR-1, HCCR2, SLC55A3
MANE Select transcript
ENST00000262055.9NM_015416.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads LETMD1 yet. The test sequences your whole genome, so your data includes it all the same.

How LETMD1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where LETMD1 sits. LETMD1 and 16 genes near it on chromosome 12, from 50,554,376 to 51,554,375.Chromosome 1212q13.12p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.3350.6 Mb50.8 Mb51 Mb51.2 Mb51.4 MbDIP2B: 50,504,962–50,748,657, forward strandDIP2BATF1: 50,763,710–50,821,162, forward strandATF1TMPRSS12: 50,842,920–50,887,884, forward strandTMPRSS12TMT1A: 50,923,472–50,932,510, forward strandTMT1A: 50,924,969–50,970,700, forward strandSLC11A2: 50,952,060–51,028,566, reverse strandSLC11A2HIGD1C: 50,952,538–50,970,860, forward strandHIGD1CLETMD1: 51,048,327–51,060,424, forward strandLETMD1CSRNP2: 51,061,205–51,083,664, reverse strandCSRNP2TFCP2: 51,093,656–51,173,137, reverse strandTFCP2POU6F1: 51,186,936–51,218,086, reverse strandPOU6F1DAZAP2: 51,238,724–51,272,164, forward strandDAZAP2SMAGP: 51,244,558–51,270,517, reverse strandSMAGPBIN2: 51,281,038–51,324,668, reverse strandBIN2CELA1: 51,328,442–51,346,804, reverse strandCELA1GALNT6: 51,351,247–51,392,867, reverse strandGALNT6SLC4A8: 51,391,317–51,515,763, forward strandSLC4A8Diagram of LETMD1: 9 exons on the forward strand of chromosome 12Exon 1: 51,048,327–51,048,478, 152 basesExon 2: 51,049,034–51,049,185, 152 basesExon 3: 51,052,092–51,052,207, 116 basesExon 4: 51,053,778–51,053,860, 83 basesExon 5: 51,055,835–51,056,021, 187 basesExon 6: 51,056,144–51,056,245, 102 basesExon 7: 51,056,350–51,056,502, 153 basesExon 8: 51,058,032–51,058,128, 97 basesExon 9: 51,059,361–51,060,424, 1,064 bases1234567895′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.1 kb of the gene's 12.1 kb; 1,083 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). LETMD1 gene: LETM1 domain containing 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/letmd1

Vancouver

Dante Labs. LETMD1 gene: LETM1 domain containing 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/letmd1

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