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Gene

LCE3D

late cornified envelope 3D

Summary

Cytogenetic location
1q21.3
Coordinates
Chromosome 1: 152,579,381–152,580,516 (GRCh38)
Exons
2 exons across 1.1 kb
Protein
92 amino acids
Also known as
LEP16
Previous symbols
SPRL6B, SPRL6A
MANE Select transcript
ENST00000368787.4NM_032563.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads LCE3D yet. The test sequences your whole genome, so your data includes it all the same.

How LCE3D is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where LCE3D sits. LCE3D and 38 genes near it on chromosome 1, from 152,079,949 to 153,079,948.Chromosome 11q21.3p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44152.2 Mb152.4 Mb152.6 Mb152.8 Mb153 MbTCHHL1: 152,084,141–152,089,064, reverse strandTCHHL1TCHH: 152,106,317–152,115,444, reverse strandTCHHRPTN: 152,153,595–152,159,228, reverse strandRPTNHRNR: 152,212,076–152,224,193, reverse strandHRNRFLG: 152,302,165–152,325,239, reverse strandFLGFLG2: 152,348,735–152,360,006, reverse strandFLG2CRNN: 152,409,242–152,414,279, reverse strandCRNNLCE5A: 152,510,803–152,512,177, forward strandLCE5ACRCT1: 152,514,482–152,516,008, forward strandCRCT1LCE3E: 152,565,654–152,566,780, reverse strandLCE3ELCE3D: 152,579,381–152,580,516, reverse strandLCE3DLCE3C: 152,600,234–152,601,086, forward strandLCE3CLCE3B: 152,613,811–152,614,098, forward strandLCE3BLCE3A: 152,622,834–152,623,103, reverse strandLCE3ALCE2D: 152,658,824–152,664,659, forward strandLCE2DLCE2C: 152,675,279–152,676,569, forward strandLCE2CLCE2B: 152,686,123–152,687,397, forward strandLCE2BLCE2A: 152,698,345–152,699,442, forward strandLCE2ALCE4A: 152,708,160–152,709,434, forward strandKPLCE: 152,719,522–152,720,470, forward strandKPRP: 152,758,025–152,762,056, forward strandKPRPLCE1F: 152,775,140–152,777,024, forward strandLCE1FLCE1E: 152,786,214–152,788,426, forward strandLCE1ELCE1D: 152,796,721–152,798,181, forward strandLCE1DLCE1C: 152,804,832–152,806,651, reverse strandLCE1B: 152,811,971–152,813,108, forward strandLCE1A: 152,827,473–152,828,097, forward strandLCE6A: 152,842,856–152,843,983, forward strandLCE6ALCE7A: 152,859,996–152,861,252, forward strandLCE7ASMCP: 152,870,060–152,885,047, forward strandSMCPIVL: 152,908,539–152,911,886, forward strandIVLSPRR5: 152,947,206–152,949,255, forward strandSPRR5SPRR4: 152,970,648–152,972,574, forward strandSPRR4SPRR1A: 152,984,081–152,985,814, forward strandSPRR1ASPRR3: 153,001,743–153,003,859, forward strandSPRR3SPRR1B: 153,031,196–153,032,900, forward strandSPRR1BSPRR2D: 153,039,726–153,066,351, reverse strandSPRR2DSPRR2A: 153,056,118–153,065,583, reverse strandSPRR2ASPRR2B: 153,070,216–153,087,834, reverse strandSPRR2BDiagram of LCE3D: 2 exons on the reverse strand of chromosome 1Exon 2: 152,579,381–152,579,957, 577 basesExon 1: 152,580,469–152,580,516, 48 bases215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 0.6 kb of the gene's 1.1 kb; 279 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). LCE3D gene: late cornified envelope 3D. Retrieved 17 October 2026, from https://dantelabs.com/genes/lce3d

Vancouver

Dante Labs. LCE3D gene: late cornified envelope 3D [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/lce3d

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