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Gene

ITGAE

integrin subunit alpha E

Summary

Cytogenetic location
17p13.2
Coordinates
Chromosome 17: 3,714,628–3,801,188 (GRCh38)
Exons
31 exons across 86.6 kb
Protein
1,179 amino acids
Also known as
CD103, HUMINAE
MANE Select transcript
ENST00000263087.9NM_002208.5
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads ITGAE yet. The test sequences your whole genome, so your data includes it all the same.

How ITGAE is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 17, with a bracket where ITGAE sits. ITGAE and 25 genes near it on chromosome 17, from 3,257,908 to 4,257,907.Chromosome 1717p13.2p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.33.4 Mb3.6 Mb3.8 Mb4 Mb4.2 MbOR3A2: 3,276,177–3,386,328, reverse strandOR3A2OR3A1: 3,291,017–3,298,360, reverse strandOR3A1OR1R1: 3,385,930–3,386,874, forward strandOR1R1OR1E1: 3,397,104–3,398,410, reverse strandOR1E1OR3A3: 3,411,370–3,424,070, forward strandOR3A3OR1E2: 3,432,870–3,433,841, reverse strandOR1E2SPATA22: 3,440,011–3,513,852, reverse strandSPATA22ASPA: 3,472,374–3,503,405, forward strandASPATRPV3: 3,510,502–3,557,812, reverse strandTRPV3TRPV1: 3,565,444–3,609,880, reverse strandTRPV1: 3,585,149–3,636,249, reverse strandSHPK: 3,607,433–3,636,637, reverse strandSHPKCTNS: 3,636,446–3,663,103, forward strandTAX1BP3: 3,659,751–3,668,679, reverse strandTAX1BP3P2RX5-TAX1BP3: 3,663,063–3,696,194, reverse strandP2RX5-TAX1BP3EMC6: 3,668,794–3,672,835, forward strandEMC6P2RX5: 3,669,763–3,696,398, reverse strandP2RX5ITGAE: 3,714,628–3,801,188, reverse strandITGAEHASPIN: 3,723,903–3,726,699, forward strandHASPINNCBP3: 3,802,158–3,846,263, reverse strandNCBP3CAMKK1: 3,860,315–3,894,891, reverse strandCAMKK1P2RX1: 3,896,592–3,916,580, reverse strandP2RX1ATP2A3: 3,923,866–3,964,499, reverse strandATP2A3ZZEF1: 4,004,432–4,143,628, reverse strandZZEF1CYB5D2: 4,143,168–4,188,683, forward strandCYB5D2ANKFY1: 4,163,821–4,263,995, reverse strandANKFY1Diagram of ITGAE: 31 exons on the reverse strand of chromosome 17Exon 31: 3,714,628–3,714,942, 315 basesExon 30: 3,716,688–3,716,798, 111 basesExon 29: 3,720,307–3,720,402, 96 basesExon 28: 3,723,288–3,723,383, 96 basesExon 27: 3,723,688–3,723,744, 57 basesExon 26: 3,727,919–3,728,026, 108 basesExon 25: 3,728,105–3,728,168, 64 basesExon 24: 3,729,478–3,729,555, 78 basesExon 23: 3,731,104–3,731,183, 80 basesExon 22: 3,732,368–3,732,466, 99 basesExon 21: 3,734,817–3,734,949, 133 basesExon 20: 3,739,805–3,739,878, 74 basesExon 19: 3,743,489–3,743,617, 129 basesExon 18: 3,745,764–3,745,927, 164 basesExon 17: 3,747,922–3,748,052, 131 basesExon 16: 3,750,352–3,750,482, 131 basesExon 15: 3,751,650–3,751,874, 225 basesExon 14: 3,753,290–3,753,430, 141 basesExon 13: 3,753,783–3,753,925, 143 basesExon 12: 3,755,117–3,755,261, 145 basesExon 11: 3,755,830–3,755,897, 68 basesExon 10: 3,756,984–3,757,134, 151 basesExon 9: 3,757,706–3,757,859, 154 basesExon 8: 3,759,402–3,759,553, 152 basesExon 7: 3,760,172–3,760,287, 116 basesExon 6: 3,761,013–3,761,177, 165 basesExon 5: 3,761,403–3,761,520, 118 basesExon 4: 3,761,915–3,761,982, 68 basesExon 3: 3,763,869–3,763,960, 92 basesExon 2: 3,777,540–3,777,660, 121 basesExon 1: 3,801,111–3,801,188, 78 bases312015′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.8 kb of the gene's 86.6 kb; 3,540 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). ITGAE gene: integrin subunit alpha E. Retrieved 17 October 2026, from https://dantelabs.com/genes/itgae

Vancouver

Dante Labs. ITGAE gene: integrin subunit alpha E [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/itgae

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