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Gene

FCHSD1

FCH and double SH3 domains 1

Summary

Cytogenetic location
5q31.3
Coordinates
Chromosome 5: 141,639,302–141,651,418 (GRCh38)
Exons
20 exons across 12.1 kb
Protein
690 amino acids
Also known as
FLJ00007
MANE Select transcript
ENST00000435817.7NM_033449.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads FCHSD1 yet. The test sequences your whole genome, so your data includes it all the same.

How FCHSD1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 5, with a bracket where FCHSD1 sits. FCHSD1 and 46 genes near it on chromosome 5, from 141,145,360 to 142,145,359.Chromosome 55q31.3p15.33p15.32p15.31p15.2p15.1p14.3p14.2p14.1p13.3p13.2p13.1p12p11q11.1q11.2q12.1q12.2q12.3q13.1q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q31.1q31.2q31.3q32q33.1q33.2q33.3q34q35.1q35.2q35.3141.2 Mb141.4 Mb141.6 Mb141.8 Mb142 MbPCDHB6: 141,150,057–141,153,287, forward strandPCDHB6PCDHB7: 141,172,644–141,176,383, forward strandPCDHB8: 141,177,790–141,182,369, forward strandPCDHB8PCDHB16: 141,182,387–141,186,226, forward strandPCDHB9: 141,187,127–141,191,541, forward strandPCDHB10: 141,192,353–141,195,647, forward strandPCDHB11: 141,199,610–141,203,779, forward strandPCDHB12: 141,208,697–141,212,571, forward strandPCDHB13: 141,213,919–141,218,979, forward strandPCDHB13PCDHB14: 141,223,343–141,227,759, forward strandPCDHB14: 141,223,372–141,245,861, forward strandPCDHB15: 141,245,395–141,249,365, forward strandPCDHB15TAF7: 141,259,884–141,320,784, reverse strandTAF7SLC25A2: 141,302,635–141,304,049, reverse strandSLC25A2PCDHGA1: 141,330,495–141,512,977, forward strandPCDHGA2: 141,338,754–141,512,977, forward strandPCDHGA3: 141,343,819–141,512,977, forward strandPCDHGB1: 141,350,083–141,512,977, forward strandPCDHGA4: 141,355,004–141,512,977, forward strandPCDHGB2: 141,359,971–141,512,977, forward strandPCDHGA5: 141,364,162–141,512,977, forward strandPCDHGB3: 141,370,237–141,512,977, forward strandPCDHGA6: 141,373,878–141,512,977, forward strandPCDHGA7: 141,382,702–141,512,977, forward strandPCDHGB4: 141,387,698–141,512,977, forward strandPCDHGA8: 141,390,157–141,512,977, forward strandPCDHGB5: 141,397,942–141,512,977, forward strandPCDHGA9: 141,402,765–141,512,977, forward strandPCDHGB6: 141,407,989–141,512,977, forward strandPCDHGA10: 141,412,981–141,512,977, forward strandPCDHGB7: 141,417,642–141,512,977, forward strandPCDHGA11: 141,421,021–141,512,977, forward strandPCDHGA12: 141,430,507–141,512,977, forward strandPCDHGC3: 141,475,929–141,512,977, forward strandPCDHGC3PCDHGC4: 141,484,997–141,512,977, forward strandPCDHGC4PCDHGC5: 141,489,067–141,512,977, forward strandPCDHGC5DIAPH1: 141,515,016–141,619,194, reverse strandDIAPH1HDAC3: 141,620,766–141,637,304, reverse strandHDAC3RELL2: 141,636,950–141,641,065, forward strandRELL2FCHSD1: 141,639,302–141,651,418, reverse strandFCHSD1ARAP3: 141,653,204–141,682,255, reverse strandARAP3PCDH1: 141,853,090–141,879,246, reverse strandPCDH1DELE1: 141,923,800–141,952,031, forward strandDELE1PCDH12: 141,943,581–141,969,741, reverse strandPCDH12RNF14: 141,958,305–142,003,016, forward strandRNF14GNPDA1: 141,991,749–142,013,061, reverse strandGNPDA1NDFIP1: 142,108,515–142,171,800, forward strandNDFIP1Diagram of FCHSD1: 20 exons on the reverse strand of chromosome 5Exon 20: 141,639,302–141,641,563, 2,262 basesExon 19: 141,641,702–141,641,757, 56 basesExon 18: 141,643,001–141,643,088, 88 basesExon 17: 141,644,218–141,644,438, 221 basesExon 16: 141,644,573–141,644,690, 118 basesExon 15: 141,644,859–141,644,942, 84 basesExon 14: 141,645,020–141,645,148, 129 basesExon 13: 141,645,771–141,645,932, 162 basesExon 12: 141,646,087–141,646,191, 105 basesExon 11: 141,646,603–141,646,722, 120 basesExon 10: 141,647,135–141,647,230, 96 basesExon 9: 141,647,398–141,647,520, 123 basesExon 8: 141,647,968–141,648,096, 129 basesExon 7: 141,648,957–141,649,020, 64 basesExon 6: 141,649,172–141,649,308, 137 basesExon 5: 141,649,395–141,649,536, 142 basesExon 4: 141,649,887–141,649,954, 68 basesExon 3: 141,650,359–141,650,404, 46 basesExon 2: 141,651,020–141,651,117, 98 basesExon 1: 141,651,348–141,651,418, 71 bases201816141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.3 kb of the gene's 12.1 kb; 2,073 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). FCHSD1 gene: FCH and double SH3 domains 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/fchsd1

Vancouver

Dante Labs. FCHSD1 gene: FCH and double SH3 domains 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/fchsd1

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