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Gene

EFCC1

EF-hand and coiled-coil domain containing 1

Summary

Cytogenetic location
3q21.3
Coordinates
Chromosome 3: 129,001,304–129,040,742 (GRCh38)
Exons
8 exons across 39.4 kb
Protein
599 amino acids
Also known as
FLJ12057
Previous symbols
C3orf73, CCDC48
MANE Select transcript
ENST00000683648.1NM_001377500.1
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads EFCC1 yet. The test sequences your whole genome, so your data includes it all the same.

How EFCC1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 3, with a bracket where EFCC1 sits. EFCC1 and 15 genes near it on chromosome 3, from 128,521,023 to 129,521,022.Chromosome 33q21.3p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q29128.6 Mb128.8 Mb129 Mb129.2 Mb129.4 MbRPN1: 128,619,968–128,681,075, reverse strandRPN1RAB7A: 128,693,669–128,825,980, forward strandRAB7AACAD9: 128,879,494–128,924,003, forward strandACAD9CFAP92: 128,909,866–129,002,690, reverse strandCFAP92EFCC1: 129,001,304–129,040,742, forward strandEFCC1GP9: 129,060,774–129,062,435, forward strandGP9RAB43: 129,087,569–129,123,694, reverse strandRAB43ISY1-RAB43: 129,087,575–129,161,036, reverse strandISY1-RAB43ISY1: 129,127,415–129,161,349, reverse strandISY1CNBP: 129,167,291–129,184,008, reverse strandCNBPCOPG1: 129,249,575–129,278,068, forward strandCOPG1HMCES: 129,278,441–129,306,283, forward strandHMCESH1-10: 129,314,771–129,316,286, reverse strandH1-10EFCAB12: 129,401,321–129,428,645, reverse strandEFCAB12IFT122: 129,429,607–129,520,510, forward strandIFT122MBD4: 129,430,282–129,440,543, reverse strandMBD4Diagram of EFCC1: 8 exons on the forward strand of chromosome 3Exon 1: 129,001,304–129,002,324, 1,021 basesExon 2: 129,003,794–129,004,077, 284 basesExon 3: 129,030,703–129,030,860, 158 basesExon 4: 129,032,819–129,032,966, 148 basesExon 5: 129,034,164–129,034,329, 166 basesExon 6: 129,036,977–129,037,117, 141 basesExon 7: 129,038,831–129,038,900, 70 basesExon 8: 129,039,712–129,040,742, 1,031 bases123456785′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3 kb of the gene's 39.4 kb; 1,800 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). EFCC1 gene: EF-hand and coiled-coil domain containing 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/efcc1

Vancouver

Dante Labs. EFCC1 gene: EF-hand and coiled-coil domain containing 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/efcc1

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