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Gene

CLEC4E

C-type lectin domain family 4 member E

Summary

Cytogenetic location
12p13.31
Coordinates
Chromosome 12: 8,533,305–8,540,905 (GRCh38)
Exons
6 exons across 7.6 kb
Protein
219 amino acids
Also known as
MINCLE
Previous symbols
CLECSF9
MANE Select transcript
ENST00000299663.8NM_014358.4
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads CLEC4E yet. The test sequences your whole genome, so your data includes it all the same.

How CLEC4E is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where CLEC4E sits. CLEC4E and 16 genes near it on chromosome 12, from 8,037,105 to 9,037,104.Chromosome 1212p13.31p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.338.2 Mb8.4 Mb8.6 Mb8.8 Mb9 MbFOXJ2: 8,032,674–8,055,522, forward strandFOXJ2C3AR1: 8,056,844–8,066,440, reverse strandC3AR1NECAP1: 8,076,939–8,097,881, forward strandNECAP1CLEC4A: 8,123,617–8,138,607, forward strandCLEC4A: 8,138,140–8,175,320, forward strandZNF705A: 8,157,015–8,188,537, forward strandZNF705AFAM90A1: 8,221,260–8,227,621, reverse strandFAM90A1CLEC6A: 8,455,950–8,479,779, forward strandCLEC6ACLEC4D: 8,509,475–8,522,641, forward strandCLEC4DCLEC4E: 8,533,305–8,540,905, reverse strandCLEC4EAICDA: 8,602,155–8,613,242, reverse strandAICDAMFAP5: 8,637,346–8,672,519, reverse strandMFAP5RIMKLB: 8,681,483–8,783,095, forward strandRIMKLBA2ML1: 8,822,466–8,887,001, forward strandA2ML1PHC1: 8,913,824–8,944,860, forward strandPHC1M6PR: 8,940,358–8,951,856, reverse strandM6PRKLRG1: 8,950,044–9,165,627, forward strandKLRG1Diagram of CLEC4E: 6 exons on the reverse strand of chromosome 12Exon 6: 8,533,305–8,534,809, 1,505 basesExon 5: 8,536,090–8,536,205, 116 basesExon 4: 8,537,115–8,537,266, 152 basesExon 3: 8,539,217–8,539,306, 90 basesExon 2: 8,539,855–8,539,947, 93 basesExon 1: 8,540,761–8,540,905, 145 bases6543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.1 kb of the gene's 7.6 kb; 660 of those bases code for the protein.

Sequencing CLEC4E

1Low

How hard CLEC4E is to sequence with short reads, out of 100

  • Mappability0%
  • Homology0%
  • Repeats4.5%
  • GC content0%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). CLEC4E gene: C-type lectin domain family 4 member E. Retrieved 17 October 2026, from https://dantelabs.com/genes/clec4e

Vancouver

Dante Labs. CLEC4E gene: C-type lectin domain family 4 member E [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/clec4e

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