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Gene

CDC40

cell division cycle 40

Summary

Cytogenetic location
6q21
Coordinates
Chromosome 6: 110,180,427–110,232,232 (GRCh38)
Exons
15 exons across 51.8 kb
Protein
579 amino acids
Also known as
PRP17, EHB3, PRPF17, FLJ10564
MANE Select transcript
ENST00000307731.2NM_015891.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CDC40 yet. The test sequences your whole genome, so your data includes it all the same.

How CDC40 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 6, with a bracket where CDC40 sits. CDC40 and 7 genes near it on chromosome 6, from 109,706,330 to 110,706,329.Chromosome 66q21p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q27109.8 Mb110 Mb110.2 Mb110.4 Mb110.6 MbFIG4: 109,690,609–109,878,098, forward strandFIG4GPR6: 109,978,256–109,980,765, forward strandGPR6WASF1: 110,099,581–110,180,032, reverse strandWASF1CDC40: 110,180,427–110,232,232, forward strandCDC40METTL24: 110,242,892–110,358,502, reverse strandMETTL24DDO: 110,388,321–110,415,862, reverse strandDDOSLC22A16: 110,424,687–110,476,681, reverse strandSLC22A16CDK19: 110,609,978–110,815,958, reverse strandCDK19Diagram of CDC40: 15 exons on the forward strand of chromosome 6Exon 1: 110,180,427–110,180,633, 207 basesExon 2: 110,193,182–110,193,268, 87 basesExon 3: 110,201,558–110,201,687, 130 basesExon 4: 110,207,506–110,207,589, 84 basesExon 5: 110,209,084–110,209,223, 140 basesExon 6: 110,210,707–110,210,803, 97 basesExon 7: 110,212,133–110,212,272, 140 basesExon 8: 110,213,086–110,213,160, 75 basesExon 9: 110,215,286–110,215,331, 46 basesExon 10: 110,217,702–110,217,803, 102 basesExon 11: 110,219,364–110,219,479, 116 basesExon 12: 110,219,736–110,219,869, 134 basesExon 13: 110,226,167–110,226,243, 77 basesExon 14: 110,228,832–110,228,976, 145 basesExon 15: 110,229,954–110,232,232, 2,279 bases12468101214155′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.9 kb of the gene's 51.8 kb; 1,740 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). CDC40 gene: cell division cycle 40. Retrieved 16 October 2026, from https://dantelabs.com/genes/cdc40

Vancouver

Dante Labs. CDC40 gene: cell division cycle 40 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/cdc40

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