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Gene

STX12

syntaxin 12

Summary

Cytogenetic location
1p35.3
Coordinates
Chromosome 1: 27,773,219–27,824,443 (GRCh38)
Exons
9 exons across 51.2 kb
Protein
276 amino acids
Also known as
STX13, STX14
MANE Select transcript
ENST00000373943.9NM_177424.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads STX12 yet. The test sequences your whole genome, so your data includes it all the same.

How STX12 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where STX12 sits. STX12 and 22 genes near it on chromosome 1, from 27,298,831 to 28,298,830.Chromosome 11p35.3p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q4427.4 Mb27.6 Mb27.8 Mb28 Mb28.2 MbWDTC1: 27,233,776–27,308,715, forward strandWDTC1TMEM222: 27,322,139–27,336,401, forward strandTMEM222SYTL1: 27,342,009–27,353,937, forward strandMAP3K6: 27,355,179–27,366,986, reverse strandMAP3K6FCN3: 27,369,108–27,374,920, reverse strandFCN3CD164L2: 27,379,176–27,383,339, reverse strandCD164L2GPR3: 27,392,614–27,395,814, forward strandGPR3WASF2: 27,404,226–27,490,308, reverse strandWASF2AHDC1: 27,534,035–27,604,431, reverse strandAHDC1FGR: 27,611,388–27,635,565, reverse strandFGRIFI6: 27,666,064–27,672,212, reverse strandIFI6FAM76A: 27,725,946–27,763,118, forward strandFAM76ASTX12: 27,773,219–27,824,443, forward strandSTX12PPP1R8: 27,830,763–27,851,676, forward strandPPP1R8THEMIS2: 27,872,537–27,887,067, forward strandTHEMIS2RPA2: 27,891,524–27,914,751, reverse strandRPA2SMPDL3B: 27,934,967–27,959,157, forward strandSMPDL3BXKR8: 27,959,588–27,968,094, forward strandXKR8EYA3: 27,970,344–28,088,731, reverse strandEYA3PTAFR: 28,147,166–28,194,083, reverse strandPTAFRDNAJC8: 28,198,626–28,233,087, reverse strandDNAJC8ATP5IF1: 28,236,072–28,246,908, forward strandATP5IF1SESN2: 28,259,473–28,282,491, forward strandSESN2Diagram of STX12: 9 exons on the forward strand of chromosome 1Exon 1: 27,773,219–27,773,425, 207 basesExon 2: 27,789,562–27,789,631, 70 basesExon 3: 27,793,533–27,793,632, 100 basesExon 4: 27,801,678–27,801,815, 138 basesExon 5: 27,810,246–27,810,289, 44 basesExon 6: 27,812,163–27,812,268, 106 basesExon 7: 27,817,851–27,817,923, 73 basesExon 8: 27,819,650–27,819,732, 83 basesExon 9: 27,822,231–27,824,443, 2,213 bases1234567895′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3 kb of the gene's 51.2 kb; 831 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). STX12 gene: syntaxin 12. Retrieved 17 October 2026, from https://dantelabs.com/genes/stx12

Vancouver

Dante Labs. STX12 gene: syntaxin 12 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/stx12

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