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Gene

SPACA5

sperm acrosome associated 5

Summary

Cytogenetic location
Xp11.23
Coordinates
Chromosome X: 48,006,988–48,009,733 (GRCh38)
Exons
4 exons across 2.7 kb
Protein
159 amino acids
Also known as
SLLP2, LYZL5, LYC5, UNQ6288, dJ54B20.3, PNPK6288
MANE Select transcript
ENST00000376940.4NM_001394298.1
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SPACA5 yet. The test sequences your whole genome, so your data includes it all the same.

How SPACA5 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome X, with a bracket where SPACA5 sits. SPACA5 and 17 genes near it on chromosome X, from 47,508,361 to 48,508,360.Chromosome XXp11.23p22.33p22.32p22.31p22.2p22.13p22.12p22.11p21.3p21.2p21.1p11.4p11.3p11.23p11.22p11.21p11.1q11.1q11.2q12q13.1q13.2q13.3q21.1q21.2q21.31q21.32q21.33q22.1q22.2q22.3q23q24q25q26.1q26.2q26.3q27.1q27.2q27.3q2847.6 Mb47.8 Mb48 Mb48.2 Mb48.4 MbARAF: 47,561,043–47,571,921, forward strandARAFSYN1: 47,571,890–47,619,970, reverse strandSYN1TIMP1: 47,582,227–47,586,793, forward strandTIMP1CFP: 47,621,537–47,630,305, reverse strandCFPELK1: 47,631,617–47,650,604, reverse strandELK1UXT: 47,651,792–47,659,301, reverse strandUXTZNF81: 47,836,471–48,003,066, forward strandZNF81ZNF182: 47,974,851–48,004,375, reverse strandZNF182ZNF630: 47,983,356–48,071,893, reverse strandZNF630SPACA5: 48,006,988–48,009,733, forward strandSPACA5SPACA5B: 48,130,626–48,132,620, forward strandSPACA5BSSX5: 48,186,220–48,196,797, reverse strandSSX5SSX1: 48,255,368–48,267,444, forward strandSSX1SSX3: 48,337,725–48,356,750, reverse strandSSX3SSX4: 48,383,516–48,393,347, forward strandSSX4SSX4B: 48,402,082–48,411,960, reverse strandSSX4BSLC38A5: 48,458,536–48,470,554, reverse strandSLC38A5FTSJ1: 48,476,021–48,486,364, forward strandFTSJ1Diagram of SPACA5: 4 exons on the forward strand of chromosome XExon 1: 48,006,988–48,007,947, 960 basesExon 2: 48,008,376–48,008,534, 159 basesExon 3: 48,009,366–48,009,444, 79 basesExon 4: 48,009,549–48,009,733, 185 bases12345′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.4 kb of the gene's 2.7 kb; 480 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SPACA5 gene: sperm acrosome associated 5. Retrieved 17 October 2026, from https://dantelabs.com/genes/spaca5

Vancouver

Dante Labs. SPACA5 gene: sperm acrosome associated 5 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/spaca5

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