Skip to content
Use your HSA or FSA funds

Gene

SMCO2

single-pass membrane protein with coiled-coil domains 2

Summary

Cytogenetic location
12p11.23
Coordinates
Chromosome 12: 27,446,736–27,502,185 (GRCh38)
Exons
9 exons across 55.5 kb
Protein
343 amino acids
Also known as
LOC341346
Previous symbols
C12orf70
MANE Select transcript
ENST00000535986.2NM_001395208.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SMCO2 yet. The test sequences your whole genome, so your data includes it all the same.

How SMCO2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where SMCO2 sits. SMCO2 and 11 genes near it on chromosome 12, from 26,974,461 to 27,974,460.Chromosome 1212p11.23p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.3327 Mb27.2 Mb27.4 Mb27.6 Mb27.8 MbTM7SF3: 26,954,298–27,014,507, reverse strandTM7SF3MED21: 27,022,544–27,066,343, forward strandMED21C12orf71: 27,081,057–27,084,592, reverse strandC12orf71STK38L: 27,243,968–27,325,961, forward strandSTK38LBMAL2: 27,332,801–27,425,289, forward strandBMAL2SMCO2: 27,446,736–27,502,185, forward strandSMCO2PPFIBP1: 27,523,431–27,696,302, forward strandPPFIBP1REP15: 27,696,447–27,697,596, forward strandREP15MRPS35: 27,710,796–27,756,301, forward strandMRPS35MANSC4: 27,762,291–27,780,236, reverse strandMANSC4KLHL42: 27,779,415–27,803,040, forward strandKLHL42PTHLH: 27,958,084–27,972,755, reverse strandPTHLHDiagram of SMCO2: 9 exons on the forward strand of chromosome 12Exon 1: 27,446,736–27,446,825, 90 basesExon 2: 27,470,622–27,470,765, 144 basesExon 3: 27,472,776–27,472,875, 100 basesExon 4: 27,474,786–27,474,913, 128 basesExon 5: 27,475,582–27,475,731, 150 basesExon 6: 27,488,460–27,488,547, 88 basesExon 7: 27,494,300–27,494,356, 57 basesExon 8: 27,495,680–27,495,855, 176 basesExon 9: 27,501,923–27,502,185, 263 bases1246895′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.2 kb of the gene's 55.5 kb; 1,032 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SMCO2 gene: single-pass membrane protein with coiled-coil domains 2. Retrieved 17 October 2026, from https://dantelabs.com/genes/smco2

Vancouver

Dante Labs. SMCO2 gene: single-pass membrane protein with coiled-coil domains 2 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/smco2

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test