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Gene

PAXBP1

PAX3 and PAX7 binding protein 1

Summary

Cytogenetic location
21q22.11
Coordinates
Chromosome 21: 32,733,899–32,771,755 (GRCh38)
Exons
18 exons across 37.9 kb
Protein
917 amino acids
Also known as
GCFC, fSAP105
Previous symbols
C21orf66, GCFC1
MANE Select transcript
ENST00000331923.9NM_016631.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PAXBP1 yet. The test sequences your whole genome, so your data includes it all the same.

How PAXBP1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 21, with a bracket where PAXBP1 sits. PAXBP1 and 13 genes near it on chromosome 21, from 32,252,827 to 33,252,826.Chromosome 2121q22.11p13p12p11.2p11.1q11.1q11.2q21.1q21.2q21.3q22.11q22.12q22.13q22.2q22.332.4 Mb32.6 Mb32.8 Mb33 Mb33.2 MbMIS18A: 32,268,221–32,279,098, reverse strandMIS18AMRAP: 32,291,813–32,314,784, forward strandMRAPURB1: 32,311,018–32,393,042, reverse strandURB1CFAP298-TCP10L: 32,402,511–32,612,865, reverse strandCFAP298-TCP10LEVA1C: 32,411,692–32,517,158, forward strandEVA1CTCP10L: 32,497,967–32,587,373, reverse strandTCP10LCFAP298: 32,592,074–32,612,881, reverse strandCFAP298SYNJ1: 32,628,756–32,728,395, reverse strandSYNJ1PAXBP1: 32,733,899–32,771,755, reverse strandPAXBP1EPCIP: 32,790,673–32,813,743, reverse strandEPCIPOLIG2: 33,025,327–33,029,209, forward strandOLIG2OLIG1: 33,070,141–33,072,413, forward strandOLIG1IFNAR2: 33,205,282–33,265,675, forward strandIFNAR2IFNAR2-IL10RB: 33,229,892–33,297,160, forward strandIFNAR2-IL10RBDiagram of PAXBP1: 18 exons on the reverse strand of chromosome 21Exon 18: 32,733,899–32,735,067, 1,169 basesExon 17: 32,737,254–32,737,408, 155 basesExon 16: 32,738,173–32,738,319, 147 basesExon 15: 32,743,248–32,743,314, 67 basesExon 14: 32,743,678–32,743,754, 77 basesExon 13: 32,744,792–32,744,913, 122 basesExon 12: 32,745,574–32,745,718, 145 basesExon 11: 32,748,499–32,748,698, 200 basesExon 10: 32,750,917–32,751,032, 116 basesExon 9: 32,751,119–32,751,218, 100 basesExon 8: 32,755,230–32,755,353, 124 basesExon 7: 32,759,080–32,759,269, 190 basesExon 6: 32,759,777–32,759,994, 218 basesExon 5: 32,761,059–32,761,162, 104 basesExon 4: 32,762,096–32,762,317, 222 basesExon 3: 32,764,348–32,764,524, 177 basesExon 2: 32,769,814–32,769,942, 129 basesExon 1: 32,771,326–32,771,755, 430 bases1816141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.9 kb of the gene's 37.9 kb; 2,754 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PAXBP1 gene: PAX3 and PAX7 binding protein 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/paxbp1

Vancouver

Dante Labs. PAXBP1 gene: PAX3 and PAX7 binding protein 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/paxbp1

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