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Gene

NIF3L1

NGG1 interacting factor 3 like 1

Summary

Cytogenetic location
2q33.1
Coordinates
Chromosome 2: 200,889,371–200,903,925 (GRCh38)
Exons
7 exons across 14.6 kb
Protein
377 amino acids
Also known as
CALS-7, MDS015
Previous symbols
ALS2CR1
MANE Select transcript
ENST00000409020.6NM_001369441.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads NIF3L1 yet. The test sequences your whole genome, so your data includes it all the same.

How NIF3L1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 2, with a bracket where NIF3L1 sits. NIF3L1 and 16 genes near it on chromosome 2, from 200,396,648 to 201,396,647.Chromosome 22q33.1p25.3p25.2p25.1p24.3p24.2p24.1p23.3p23.2p23.1p22.3p22.2p22.1p21p16.3p16.2p16.1p15p14p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13q14.1q14.2q14.3q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q31.1q31.2q31.3q32.1q32.2q32.3q33.1q33.2q33.3q34q35q36.1q36.2q36.3q37.1q37.2q37.3200.4 Mb200.6 Mb200.8 Mb201 Mb201.2 MbSPATS2L: 200,305,881–200,482,264, forward strandSPATS2LKCTD18: 200,488,953–200,519,784, reverse strandKCTD18SGO2: 200,510,008–200,584,096, forward strandSGO2AOX1: 200,585,864–200,677,064, forward strandAOX1BZW1: 200,810,594–200,827,921, forward strandBZW1CLK1: 200,853,009–200,864,728, reverse strandCLK1PPIL3: 200,870,907–200,889,358, reverse strandPPIL3NIF3L1: 200,889,371–200,903,925, forward strandNIF3L1ORC2: 200,908,684–200,963,704, reverse strandORC2HYCC2: 200,966,317–201,071,700, reverse strandHYCC2NDUFB3: 201,071,433–201,085,757, forward strandNDUFB3CFLAR: 201,116,005–201,176,687, forward strandCFLARCASP10: 201,182,693–201,229,428, forward strandCASP10CASP8: 201,233,443–201,361,836, forward strandCASP8FLACC1: 201,287,397–201,357,398, reverse strandFLACC1TRAK2: 201,377,207–201,453,449, reverse strandTRAK2STRADB: 201,387,858–201,502,687, forward strandSTRADBDiagram of NIF3L1: 7 exons on the forward strand of chromosome 2Exon 1: 200,889,371–200,889,652, 282 basesExon 2: 200,891,918–200,892,379, 462 basesExon 3: 200,893,246–200,893,408, 163 basesExon 4: 200,895,264–200,895,390, 127 basesExon 5: 200,897,076–200,897,214, 139 basesExon 6: 200,899,385–200,899,468, 84 basesExon 7: 200,903,494–200,903,925, 432 bases12345675′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.7 kb of the gene's 14.6 kb; 1,134 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). NIF3L1 gene: NGG1 interacting factor 3 like 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/nif3l1

Vancouver

Dante Labs. NIF3L1 gene: NGG1 interacting factor 3 like 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/nif3l1

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