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Gene

NFXL1

nuclear transcription factor, X-box binding like 1

Summary

Cytogenetic location
4p12
Coordinates
Chromosome 4: 47,847,240–47,914,583 (GRCh38)
Exons
23 exons across 67.3 kb
Protein
911 amino acids
Also known as
HOZFP
MANE Select transcript
ENST00000507489.2NM_001278624.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads NFXL1 yet. The test sequences your whole genome, so your data includes it all the same.

How NFXL1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 4, with a bracket where NFXL1 sits. NFXL1 and 9 genes near it on chromosome 4, from 47,380,912 to 48,380,911.Chromosome 44p12p16.3p16.2p16.1p15.33p15.32p15.31p15.2p15.1p14p13p12p11q11q12q13.1q13.2q13.3q21.1q21.21q21.22q21.23q21.3q22.1q22.2q22.3q23q24q25q26q27q28.1q28.2q28.3q31.1q31.21q31.22q31.23q31.3q32.1q32.2q32.3q33q34.1q34.2q34.3q35.1q35.247.4 Mb47.6 Mb47.8 Mb48 Mb48.2 MbGABRB1: 46,993,723–47,428,254, forward strandGABRB1COMMD8: 47,441,586–47,463,730, reverse strandCOMMD8ATP10D: 47,485,204–47,595,099, forward strandATP10DCORIN: 47,593,999–47,838,151, reverse strandCORINNFXL1: 47,847,240–47,914,583, reverse strandNFXL1NIPAL1: 47,914,142–48,052,430, forward strandNIPAL1CNGA1: 47,935,128–48,017,301, reverse strandCNGA1TXK: 48,063,158–48,134,265, reverse strandTXKTEC: 48,134,633–48,269,858, reverse strandTECSLAIN2: 48,341,375–48,426,201, forward strandSLAIN2Diagram of NFXL1: 23 exons on the reverse strand of chromosome 4Exon 23: 47,847,240–47,848,336, 1,097 basesExon 22: 47,851,095–47,851,148, 54 basesExon 21: 47,851,856–47,851,942, 87 basesExon 20: 47,855,059–47,855,163, 105 basesExon 19: 47,862,846–47,862,915, 70 basesExon 18: 47,875,127–47,875,293, 167 basesExon 17: 47,878,525–47,878,665, 141 basesExon 16: 47,879,096–47,879,117, 22 basesExon 15: 47,884,346–47,884,437, 92 basesExon 14: 47,885,498–47,885,657, 160 basesExon 13: 47,885,879–47,885,999, 121 basesExon 12: 47,890,613–47,890,703, 91 basesExon 11: 47,894,180–47,894,302, 123 basesExon 10: 47,896,523–47,896,647, 125 basesExon 9: 47,897,967–47,898,081, 115 basesExon 8: 47,898,757–47,898,857, 101 basesExon 7: 47,898,959–47,899,120, 162 basesExon 6: 47,899,370–47,899,548, 179 basesExon 5: 47,903,193–47,903,323, 131 basesExon 4: 47,905,237–47,905,346, 110 basesExon 3: 47,910,824–47,910,994, 171 basesExon 2: 47,913,969–47,914,205, 237 basesExon 1: 47,914,365–47,914,583, 219 bases23201510515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.9 kb of the gene's 67.3 kb; 2,736 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). NFXL1 gene: nuclear transcription factor, X-box binding like 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/nfxl1

Vancouver

Dante Labs. NFXL1 gene: nuclear transcription factor, X-box binding like 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/nfxl1

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