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Gene

GARNL3

GTPase activating Rap/RanGAP domain like 3

Summary

Cytogenetic location
9q33.3
Coordinates
Chromosome 9: 127,264,774–127,393,660 (GRCh38)
Exons
28 exons across 128.9 kb
Protein
1,013 amino acids
Also known as
DKFZp761J1523, bA356B19.1
MANE Select transcript
ENST00000373387.9NM_032293.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads GARNL3 yet. The test sequences your whole genome, so your data includes it all the same.

How GARNL3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 9, with a bracket where GARNL3 sits. GARNL3 and 18 genes near it on chromosome 9, from 126,829,217 to 127,829,216.Chromosome 99q33.3p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.3127 Mb127.2 Mb127.4 Mb127.6 Mb127.8 MbZBTB43: 126,804,988–126,838,210, forward strandZBTB43ZBTB34: 126,860,626–126,885,878, forward strandZBTB34RALGPS1: 126,914,761–127,223,166, forward strandRALGPS1ANGPTL2: 127,087,333–127,122,786, reverse strandANGPTL2GARNL3: 127,264,774–127,393,660, forward strandGARNL3SLC2A8: 127,397,131–127,408,424, forward strandSLC2A8ZNF79: 127,424,374–127,449,728, forward strandZNF79RPL12: 127,447,422–127,452,094, reverse strandRPL12LRSAM1: 127,451,469–127,503,503, forward strandLRSAM1NIBAN2: 127,505,339–127,579,049, reverse strandNIBAN2STXBP1: 127,579,370–127,696,027, forward strandSTXBP1PTRH1: 127,690,102–127,724,885, reverse strandPTRH1CFAP157: 127,706,979–127,716,002, forward strandCFAP157TTC16: 127,716,074–127,731,590, forward strandTTC16TOR2A: 127,731,516–127,735,355, reverse strandTOR2ASH2D3C: 127,738,317–127,778,771, reverse strandCDK9: 127,785,252–127,792,871, forward strandCDK9FPGS: 127,794,597–127,815,065, forward strandFPGSENG: 127,811,130–127,855,232, reverse strandENGDiagram of GARNL3: 28 exons on the forward strand of chromosome 9Exon 1: 127,264,774–127,265,021, 248 basesExon 2: 127,291,168–127,291,242, 75 basesExon 3: 127,311,636–127,311,735, 100 basesExon 4: 127,313,441–127,313,559, 119 basesExon 5: 127,318,063–127,318,127, 65 basesExon 6: 127,320,715–127,320,778, 64 basesExon 7: 127,325,069–127,325,095, 27 basesExon 8: 127,332,274–127,332,349, 76 basesExon 9: 127,333,023–127,333,121, 99 basesExon 10: 127,335,230–127,335,333, 104 basesExon 11: 127,336,128–127,336,236, 109 basesExon 12: 127,338,116–127,338,161, 46 basesExon 13: 127,339,645–127,339,751, 107 basesExon 14: 127,342,219–127,342,334, 116 basesExon 15: 127,344,235–127,344,339, 105 basesExon 16: 127,345,403–127,345,477, 75 basesExon 17: 127,348,924–127,349,035, 112 basesExon 18: 127,353,846–127,353,944, 99 basesExon 19: 127,354,294–127,354,410, 117 basesExon 20: 127,355,297–127,355,472, 176 basesExon 21: 127,357,219–127,357,377, 159 basesExon 22: 127,365,300–127,365,366, 67 basesExon 23: 127,383,438–127,383,545, 108 basesExon 24: 127,385,027–127,385,145, 119 basesExon 25: 127,387,193–127,387,331, 139 basesExon 26: 127,388,904–127,389,119, 216 basesExon 27: 127,390,641–127,390,767, 127 basesExon 28: 127,393,083–127,393,660, 578 bases1510152025285′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.6 kb of the gene's 128.9 kb; 3,042 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). GARNL3 gene: GTPase activating Rap/RanGAP domain like 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/garnl3

Vancouver

Dante Labs. GARNL3 gene: GTPase activating Rap/RanGAP domain like 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/garnl3

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