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Gene

DEPDC4

DEP domain containing 4

Summary

Cytogenetic location
12q23.1
Coordinates
Chromosome 12: 100,240,062–100,267,079 (GRCh38)
Exons
10 exons across 27 kb
Protein
496 amino acids
Also known as
DEP.4, FLJ33505
MANE Select transcript
ENST00000550587.6NM_001364818.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads DEPDC4 yet. The test sequences your whole genome, so your data includes it all the same.

How DEPDC4 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where DEPDC4 sits. DEPDC4 and 8 genes near it on chromosome 12, from 99,753,571 to 100,753,570.Chromosome 1212q23.1p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.3399.8 Mb100 Mb100.2 Mb100.4 Mb100.6 MbANKS1B: 98,726,457–99,984,964, reverse strandANKS1BBLTP3B: 100,028,455–100,142,889, reverse strandBLTP3BACTR6: 100,199,122–100,241,865, forward strandACTR6DEPDC4: 100,240,062–100,267,079, reverse strandDEPDC4SCYL2: 100,266,830–100,341,993, forward strandSCYL2SLC17A8: 100,356,842–100,422,055, forward strandSLC17A8NR1H4: 100,455,070–100,564,414, forward strandNR1H4GAS2L3: 100,573,643–100,628,288, forward strandGAS2L3ANO4: 100,717,221–101,128,648, forward strandANO4Diagram of DEPDC4: 10 exons on the reverse strand of chromosome 12Exon 10: 100,240,062–100,241,845, 1,784 basesExon 9: 100,242,486–100,242,569, 84 basesExon 8: 100,248,900–100,248,978, 79 basesExon 7: 100,252,176–100,252,301, 126 basesExon 6: 100,252,394–100,252,536, 143 basesExon 5: 100,253,489–100,253,715, 227 basesExon 4: 100,256,049–100,256,226, 178 basesExon 3: 100,262,264–100,262,409, 146 basesExon 2: 100,263,497–100,263,893, 397 basesExon 1: 100,266,920–100,267,079, 160 bases10864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.3 kb of the gene's 27 kb; 1,491 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). DEPDC4 gene: DEP domain containing 4. Retrieved 17 October 2026, from https://dantelabs.com/genes/depdc4

Vancouver

Dante Labs. DEPDC4 gene: DEP domain containing 4 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/depdc4

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