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Gene

CNOT6

CCR4-NOT transcription complex subunit 6

Summary

Cytogenetic location
5q35.3
Coordinates
Chromosome 5: 180,494,379–180,578,358 (GRCh38)
Exons
12 exons across 84 kb
Protein
557 amino acids
Also known as
CCR4, KIAA1194, Ccr4a
MANE Select transcript
ENST00000261951.9NM_001370472.1
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads CNOT6 yet. The test sequences your whole genome, so your data includes it all the same.

How CNOT6 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 5, with a bracket where CNOT6 sits. CNOT6 and 11 genes near it on chromosome 5, from 180,036,369 to 181,036,368.Chromosome 55q35.3p15.33p15.32p15.31p15.2p15.1p14.3p14.2p14.1p13.3p13.2p13.1p12p11q11.1q11.2q12.1q12.2q12.3q13.1q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q31.1q31.2q31.3q32q33.1q33.2q33.3q34q35.1q35.2q35.3180.2 Mb180.4 Mb180.6 Mb180.8 Mb181 MbRNF130: 179,911,651–180,072,151, reverse strandRNF130RASGEF1C: 180,100,795–180,209,225, reverse strandRASGEF1CMAPK9: 180,233,143–180,292,107, reverse strandMAPK9GFPT2: 180,300,668–180,353,359, reverse strandGFPT2CNOT6: 180,494,379–180,578,358, forward strandCNOT6SCGB3A1: 180,590,105–180,591,706, reverse strandSCGB3A1FLT4: 180,601,506–180,649,634, reverse strandFLT4OR2Y1: 180,739,123–180,740,058, reverse strandOR2Y1MGAT1: 180,784,780–180,815,652, reverse strandMGAT1ZFP62: 180,843,577–180,861,285, reverse strandZFP62BTNL8: 180,899,077–180,952,175, forward strandBTNL8BTNL3: 180,988,846–181,006,727, forward strandBTNL3Diagram of CNOT6: 12 exons on the forward strand of chromosome 5Exon 1: 180,494,379–180,494,763, 385 basesExon 2: 180,529,275–180,529,388, 114 basesExon 3: 180,549,931–180,550,117, 187 basesExon 4: 180,553,386–180,553,471, 86 basesExon 5: 180,564,489–180,564,593, 105 basesExon 6: 180,564,675–180,564,743, 69 basesExon 7: 180,565,820–180,565,977, 158 basesExon 8: 180,567,088–180,567,242, 155 basesExon 9: 180,567,849–180,568,003, 155 basesExon 10: 180,569,110–180,569,340, 231 basesExon 11: 180,571,230–180,571,432, 203 basesExon 12: 180,573,988–180,578,358, 4,371 bases1246810125′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.2 kb of the gene's 84 kb; 1,674 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CNOT6 gene: CCR4-NOT transcription complex subunit 6. Retrieved 17 October 2026, from https://dantelabs.com/genes/cnot6

Vancouver

Dante Labs. CNOT6 gene: CCR4-NOT transcription complex subunit 6 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/cnot6

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