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Gene

CDK5RAP3

CDK5 regulatory subunit associated protein 3

Summary

Cytogenetic location
17q21.32
Coordinates
Chromosome 17: 47,971,113–47,981,781 (GRCh38)
Exons
14 exons across 10.7 kb
Protein
506 amino acids
Also known as
MST016, FLJ13660, C53, IC53, HSF-27, OK/SW-cl.114, LZAP
MANE Select transcript
ENST00000338399.9NM_176096.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CDK5RAP3 yet. The test sequences your whole genome, so your data includes it all the same.

How CDK5RAP3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 17, with a bracket where CDK5RAP3 sits. CDK5RAP3 and 17 genes near it on chromosome 17, from 47,476,447 to 48,476,446.Chromosome 1717q21.32p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.347.6 Mb47.8 Mb48 Mb48.2 Mb48.4 MbNPEPPS: 47,522,942–47,624,707, forward strandNPEPPSKPNB1: 47,649,476–47,685,505, forward strandKPNB1TBKBP1: 47,694,030–47,712,063, forward strandTBKBP1TBX21: 47,733,236–47,746,126, forward strandTBX21OSBPL7: 47,807,363–47,821,890, reverse strandMRPL10: 47,823,272–47,831,545, reverse strandMRPL10LRRC46: 47,831,634–47,837,719, forward strandLRRC46SCRN2: 47,837,683–47,842,125, reverse strandSCRN2SP6: 47,844,908–47,855,874, reverse strandSP6SP2: 47,896,150–47,928,964, forward strandSP2PNPO: 47,941,506–47,964,354, forward strandPNPOPRR15L: 47,950,851–47,960,483, reverse strandPRR15LCDK5RAP3: 47,971,113–47,981,781, forward strandCDK5RAP3COPZ2: 48,026,142–48,038,030, reverse strandCOPZ2NFE2L1: 48,047,889–48,088,647, forward strandNFE2L1CBX1: 48,070,052–48,107,848, reverse strandCBX1SNX11: 48,103,357–48,128,226, forward strandSNX11SKAP1: 48,133,433–48,430,275, reverse strandSKAP1Diagram of CDK5RAP3: 14 exons on the forward strand of chromosome 17Exon 1: 47,971,113–47,971,152, 40 basesExon 2: 47,971,362–47,971,407, 46 basesExon 3: 47,973,519–47,973,650, 132 basesExon 4: 47,973,931–47,974,031, 101 basesExon 5: 47,974,400–47,974,448, 49 basesExon 6: 47,975,159–47,975,337, 179 basesExon 7: 47,975,514–47,975,653, 140 basesExon 8: 47,975,869–47,976,013, 145 basesExon 9: 47,976,712–47,976,822, 111 basesExon 10: 47,977,832–47,977,910, 79 basesExon 11: 47,978,829–47,978,917, 89 basesExon 12: 47,980,593–47,980,798, 206 basesExon 13: 47,981,163–47,981,334, 172 basesExon 14: 47,981,437–47,981,781, 345 bases12345678910111213145′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.8 kb of the gene's 10.7 kb; 1,521 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CDK5RAP3 gene: CDK5 regulatory subunit associated protein 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/cdk5rap3

Vancouver

Dante Labs. CDK5RAP3 gene: CDK5 regulatory subunit associated protein 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/cdk5rap3

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