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Gene

UPF3A

UPF3A regulator of nonsense mediated mRNA decay

Summary

Cytogenetic location
13q34
Coordinates
Chromosome 13: 114,281,601–114,305,817 (GRCh38)
Exons
10 exons across 24.2 kb
Protein
476 amino acids
Also known as
RENT3A, UPF3, HUPF3A
MANE Select transcript
ENST00000375299.8NM_023011.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads UPF3A yet. The test sequences your whole genome, so your data includes it all the same.

How UPF3A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 13, with a bracket where UPF3A sits. UPF3A and 7 genes near it on chromosome 13, from 113,793,709 to 114,793,708.Chromosome 1313q34p13p12p11.2p11.1q11q12.11q12.12q12.13q12.2q12.3q13.1q13.2q13.3q14.11q14.12q14.13q14.2q14.3q21.1q21.2q21.31q21.32q21.33q22.1q22.2q22.3q31.1q31.2q31.3q32.1q32.2q32.3q33.1q33.2q33.3q34113.8 Mb114 Mb114.2 Mb114.4 Mb114.6 MbTMEM255B: 113,759,194–113,816,995, forward strandTMEM255BGAS6: 113,820,468–113,864,123, reverse strandGAS6C13orf46: 113,953,705–113,974,076, reverse strandC13orf46RASA3: 113,977,783–114,132,775, reverse strandRASA3CFAP97D2: 114,154,691–114,223,085, forward strandCFAP97D2CDC16: 114,234,856–114,273,445, forward strandCDC16UPF3A: 114,281,601–114,305,817, forward strandUPF3ACHAMP1: 114,314,482–114,337,626, forward strandCHAMP1Diagram of UPF3A: 10 exons on the forward strand of chromosome 13Exon 1: 114,281,601–114,281,846, 246 basesExon 2: 114,282,021–114,282,127, 107 basesExon 3: 114,282,837–114,282,943, 107 basesExon 4: 114,286,302–114,286,400, 99 basesExon 5: 114,286,519–114,286,629, 111 basesExon 6: 114,291,489–114,291,544, 56 basesExon 7: 114,291,634–114,291,792, 159 basesExon 8: 114,298,840–114,299,000, 161 basesExon 9: 114,301,731–114,302,025, 295 basesExon 10: 114,304,789–114,305,817, 1,029 bases15105′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.4 kb of the gene's 24.2 kb; 1,431 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). UPF3A gene: UPF3A regulator of nonsense mediated mRNA decay. Retrieved 17 October 2026, from https://dantelabs.com/genes/upf3a

Vancouver

Dante Labs. UPF3A gene: UPF3A regulator of nonsense mediated mRNA decay [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/upf3a

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