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Gene

UHRF2

ubiquitin like with PHD and ring finger domains 2

Summary

Cytogenetic location
9p24.1
Coordinates
Chromosome 9: 6,413,199–6,507,054 (GRCh38)
Exons
16 exons across 93.9 kb
Protein
802 amino acids
Also known as
RNF107, NIRF, URF2, MGC33463, TDRD23
MANE Select transcript
ENST00000276893.10NM_152896.3
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads UHRF2 yet. The test sequences your whole genome, so your data includes it all the same.

How UHRF2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 9, with a bracket where UHRF2 sits. UHRF2 and 6 genes near it on chromosome 9, from 5,960,127 to 6,960,126.Chromosome 99p24.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.36 Mb6.2 Mb6.4 Mb6.6 Mb6.8 MbBRD10: 5,881,596–6,008,495, reverse strandBRD10RANBP6: 6,011,025–6,015,639, reverse strandRANBP6IL33: 6,215,136–6,281,596, forward strandIL33TPD52L3: 6,328,375–6,331,891, forward strandTPD52L3UHRF2: 6,413,199–6,507,054, forward strandUHRF2GLDC: 6,532,464–6,645,734, reverse strandGLDCKDM4C: 6,720,863–7,175,648, forward strandKDM4CDiagram of UHRF2: 16 exons on the forward strand of chromosome 9Exon 1: 6,413,199–6,413,643, 445 basesExon 2: 6,420,912–6,421,142, 231 basesExon 3: 6,433,914–6,434,173, 260 basesExon 4: 6,460,573–6,460,791, 219 basesExon 5: 6,475,391–6,475,500, 110 basesExon 6: 6,477,622–6,477,808, 187 basesExon 7: 6,481,643–6,481,766, 124 basesExon 8: 6,481,992–6,482,099, 108 basesExon 9: 6,486,821–6,486,925, 105 basesExon 10: 6,493,826–6,493,932, 107 basesExon 11: 6,497,198–6,497,360, 163 basesExon 12: 6,498,018–6,498,158, 141 basesExon 13: 6,499,835–6,499,931, 97 basesExon 14: 6,500,552–6,500,709, 158 basesExon 15: 6,504,593–6,504,691, 99 basesExon 16: 6,506,033–6,507,054, 1,022 bases12468101214165′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.6 kb of the gene's 93.9 kb; 2,409 of those bases code for the protein.

Sequencing UHRF2

12Moderate

How hard UHRF2 is to sequence with short reads, out of 100

Some of UHRF2's exons sit where short reads can miss or misplace a change.

What adds to it: the share of UHRF2's exons in each kind of hard region

  • Mappability4.5%
  • Homology29%
  • Repeats2.2%
  • GC content10%
  • Reference coverage0%

A Dante Labs score from our own research, built on NIST's Genome in a Bottle maps of hard-to-sequence regions.How it's scored

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). UHRF2 gene: ubiquitin like with PHD and ring finger domains 2. Retrieved 18 October 2026, from https://dantelabs.com/genes/uhrf2

Vancouver

Dante Labs. UHRF2 gene: ubiquitin like with PHD and ring finger domains 2 [Internet]. [cited 18 October 2026]. Available from: https://dantelabs.com/genes/uhrf2

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