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Gene

UBE3D

ubiquitin protein ligase E3D

Summary

Cytogenetic location
6q14.1
Coordinates
Chromosome 6: 82,892,390–83,065,841 (GRCh38)
Exons
10 exons across 173.5 kb
Protein
389 amino acids
Also known as
DKFZp434A1520, H10BH, YJR141W
Previous symbols
C6orf157, UBE2CBP
MANE Select transcript
ENST00000369747.8NM_198920.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads UBE3D yet. The test sequences your whole genome, so your data includes it all the same.

How UBE3D is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 6, with a bracket where UBE3D sits. UBE3D and 4 genes near it on chromosome 6, from 82,479,116 to 83,479,115.Chromosome 66q14.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q2782.6 Mb82.8 Mb83 Mb83.2 Mb83.4 MbUBE3D: 82,892,390–83,065,841, reverse strandUBE3DDOP1A: 83,067,638–83,171,350, forward strandDOP1APGM3: 83,147,324–83,194,005, reverse strandPGM3RWDD2A: 83,193,337–83,198,950, forward strandRWDD2AME1: 83,210,389–83,431,370, reverse strandME1Diagram of UBE3D: 10 exons on the reverse strand of chromosome 6Exon 10: 82,892,390–82,893,042, 653 basesExon 9: 82,957,312–82,957,450, 139 basesExon 8: 83,018,973–83,019,136, 164 basesExon 7: 83,022,453–83,022,561, 109 basesExon 6: 83,023,969–83,024,038, 70 basesExon 5: 83,038,416–83,038,485, 70 basesExon 4: 83,044,428–83,044,659, 232 basesExon 3: 83,054,148–83,054,238, 91 basesExon 2: 83,057,826–83,058,022, 197 basesExon 1: 83,065,642–83,065,841, 200 bases10864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.9 kb of the gene's 173.5 kb; 1,170 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). UBE3D gene: ubiquitin protein ligase E3D. Retrieved 17 October 2026, from https://dantelabs.com/genes/ube3d

Vancouver

Dante Labs. UBE3D gene: ubiquitin protein ligase E3D [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ube3d

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