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Gene

SYAP1

synapse associated protein 1

Summary

Cytogenetic location
Xp22.2
Coordinates
Chromosome X: 16,719,612–16,765,340 (GRCh38)
Exons
9 exons across 45.7 kb
Protein
352 amino acids
Also known as
FLJ14495, PRO3113
MANE Select transcript
ENST00000380155.4NM_032796.4
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SYAP1 yet. The test sequences your whole genome, so your data includes it all the same.

How SYAP1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome X, with a bracket where SYAP1 sits. SYAP1 and 5 genes near it on chromosome X, from 16,242,476 to 17,242,475.Chromosome XXp22.2p22.33p22.32p22.31p22.2p22.13p22.12p22.11p21.3p21.2p21.1p11.4p11.3p11.23p11.22p11.21p11.1q11.1q11.2q12q13.1q13.2q13.3q21.1q21.2q21.31q21.32q21.33q22.1q22.2q22.3q23q24q25q26.1q26.2q26.3q27.1q27.2q27.3q2816.4 Mb16.6 Mb16.8 Mb17 Mb17.2 MbCTPS2: 16,580,088–16,712,984, reverse strandCTPS2S100G: 16,650,158–16,654,670, forward strandS100GSYAP1: 16,719,612–16,765,340, forward strandSYAP1TXLNG: 16,786,415–16,844,519, forward strandTXLNGRBBP7: 16,838,236–16,870,415, reverse strandRBBP7REPS2: 16,946,658–17,187,961, forward strandREPS2Diagram of SYAP1: 9 exons on the forward strand of chromosome XExon 1: 16,719,612–16,719,899, 288 basesExon 2: 16,735,227–16,735,345, 119 basesExon 3: 16,736,166–16,736,232, 67 basesExon 4: 16,741,716–16,741,789, 74 basesExon 5: 16,743,701–16,743,840, 140 basesExon 6: 16,754,945–16,755,093, 149 basesExon 7: 16,756,663–16,756,721, 59 basesExon 8: 16,757,162–16,757,309, 148 basesExon 9: 16,760,232–16,765,340, 5,109 bases1246895′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.2 kb of the gene's 45.7 kb; 1,059 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SYAP1 gene: synapse associated protein 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/syap1

Vancouver

Dante Labs. SYAP1 gene: synapse associated protein 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/syap1

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