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Gene

SV2C

synaptic vesicle glycoprotein 2C

Summary

Cytogenetic location
5q13.3
Coordinates
Chromosome 5: 76,083,383–76,333,956 (GRCh38)
Exons
13 exons across 250.6 kb
Protein
727 amino acids
Also known as
SLC22B3
MANE Select transcript
ENST00000502798.7NM_014979.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SV2C yet. The test sequences your whole genome, so your data includes it all the same.

How SV2C is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 5, with a bracket where SV2C sits. SV2C and 3 genes near it on chromosome 5, from 75,708,670 to 76,708,669.Chromosome 55q13.3p15.33p15.32p15.31p15.2p15.1p14.3p14.2p14.1p13.3p13.2p13.1p12p11q11.1q11.2q12.1q12.2q12.3q13.1q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q31.1q31.2q31.3q32q33.1q33.2q33.3q34q35.1q35.2q35.375.8 Mb76 Mb76.2 Mb76.4 Mb76.6 MbPOC5: 75,674,124–75,717,453, reverse strandPOC5SV2C: 76,083,383–76,333,956, forward strandSV2CIQGAP2: 76,402,933–76,708,132, forward strandIQGAP2F2RL2: 76,615,423–76,623,425, reverse strandF2RL2Diagram of SV2C: 13 exons on the forward strand of chromosome 5Exon 1: 76,083,383–76,083,512, 130 basesExon 2: 76,131,650–76,132,330, 681 basesExon 3: 76,194,919–76,195,099, 181 basesExon 4: 76,209,736–76,209,887, 152 basesExon 5: 76,285,162–76,285,295, 134 basesExon 6: 76,285,781–76,285,870, 90 basesExon 7: 76,291,221–76,291,331, 111 basesExon 8: 76,291,768–76,291,856, 89 basesExon 9: 76,295,778–76,295,942, 165 basesExon 10: 76,298,794–76,298,927, 134 basesExon 11: 76,300,729–76,300,932, 204 basesExon 12: 76,301,386–76,301,545, 160 basesExon 13: 76,325,364–76,333,956, 8,593 bases1510135′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 10.8 kb of the gene's 250.6 kb; 2,184 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SV2C gene: synaptic vesicle glycoprotein 2C. Retrieved 17 October 2026, from https://dantelabs.com/genes/sv2c

Vancouver

Dante Labs. SV2C gene: synaptic vesicle glycoprotein 2C [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/sv2c

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