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Gene

SEC16A

SEC16 homolog A, endoplasmic reticulum export factor

Summary

Cytogenetic location
9q34.3
Coordinates
Chromosome 9: 136,440,105–136,483,040 (GRCh38)
Exons
32 exons across 42.9 kb
Protein
2,357 amino acids
Also known as
p250, Sec16L
Previous symbols
KIAA0310
MANE Select transcript
ENST00000684901.1NM_014866.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SEC16A yet. The test sequences your whole genome, so your data includes it all the same.

How SEC16A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 9, with a bracket where SEC16A sits. SEC16A and 34 genes near it on chromosome 9, from 135,961,573 to 136,961,572.Chromosome 99q34.3p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.3136 Mb136.2 Mb136.4 Mb136.6 Mb136.8 MbNACC2: 136,006,537–136,095,327, reverse strandNACC2TMEM250: 136,113,067–136,118,946, reverse strandTMEM250LHX3: 136,196,250–136,205,128, reverse strandLHX3QSOX2: 136,206,332–136,245,831, reverse strandQSOX2CCDC187: 136,249,973–136,306,901, reverse strandCCDC187GPSM1: 136,327,425–136,359,608, forward strandDNLZ: 136,359,480–136,363,773, reverse strand: 136,361,904–136,373,644, reverse strandCARD9: 136,363,956–136,373,683, reverse strandCARD9SNAPC4: 136,375,567–136,400,226, reverse strandSNAPC4ENTR1: 136,401,922–136,410,621, reverse strandENTR1PMPCA: 136,410,630–136,428,006, forward strandPMPCAINPP5E: 136,428,615–136,439,882, reverse strandINPP5ESEC16A: 136,440,105–136,483,040, reverse strandSEC16ANOTCH1: 136,494,433–136,546,048, reverse strandNOTCH1EGFL7: 136,658,284–136,672,684, forward strandEGFL7AGPAT2: 136,673,142–136,687,483, reverse strandAGPAT2DIPK1B: 136,712,302–136,724,742, forward strandDIPK1BLCN10: 136,738,167–136,743,356, reverse strandLCN10: 136,738,167–136,748,453, reverse strandLCN6: 136,744,017–136,748,531, reverse strandLCN6LCN8: 136,754,386–136,758,543, reverse strandLCN15: 136,759,634–136,766,255, reverse strandTMEM141: 136,791,303–136,793,317, forward strandTMEM141: 136,791,379–136,800,595, forward strandCCDC183: 136,796,338–136,807,741, forward strandRABL6: 136,807,848–136,841,187, forward strandRABL6AJM1: 136,842,478–136,848,801, forward strandAJM1PHPT1: 136,847,994–136,851,043, forward strandPHPT1MAMDC4: 136,850,943–136,860,802, forward strandEDF1: 136,862,113–136,866,343, reverse strandTRAF2: 136,881,903–136,929,221, forward strandTRAF2FBXW5: 136,938,431–136,950,122, reverse strandFBXW5C8G: 136,942,532–136,946,980, forward strandC8GLCN12: 136,949,391–136,956,535, forward strandLCN12Diagram of SEC16A: 32 exons on the reverse strand of chromosome 9Exon 32: 136,440,105–136,441,823, 1,719 basesExon 31: 136,443,823–136,443,900, 78 basesExon 30: 136,445,052–136,445,111, 60 basesExon 29: 136,445,645–136,445,719, 75 basesExon 28: 136,446,855–136,446,949, 95 basesExon 27: 136,447,227–136,447,364, 138 basesExon 26: 136,447,569–136,447,680, 112 basesExon 25: 136,447,853–136,447,909, 57 basesExon 24: 136,448,084–136,448,161, 78 basesExon 23: 136,451,256–136,451,408, 153 basesExon 22: 136,453,428–136,453,510, 83 basesExon 21: 136,454,109–136,454,327, 219 basesExon 20: 136,455,601–136,455,793, 193 basesExon 19: 136,456,053–136,456,166, 114 basesExon 18: 136,457,444–136,457,584, 141 basesExon 17: 136,459,134–136,459,239, 106 basesExon 16: 136,459,444–136,459,555, 112 basesExon 15: 136,459,757–136,459,874, 118 basesExon 14: 136,460,042–136,460,123, 82 basesExon 13: 136,461,177–136,461,274, 98 basesExon 12: 136,462,887–136,463,132, 246 basesExon 11: 136,463,463–136,463,601, 139 basesExon 10: 136,463,679–136,463,740, 62 basesExon 9: 136,464,420–136,464,562, 143 basesExon 8: 136,465,962–136,466,136, 175 basesExon 7: 136,466,264–136,466,462, 199 basesExon 6: 136,466,957–136,467,083, 127 basesExon 5: 136,468,415–136,468,512, 98 basesExon 4: 136,471,975–136,472,111, 137 basesExon 3: 136,474,049–136,477,684, 3,636 basesExon 2: 136,478,709–136,478,830, 122 basesExon 1: 136,482,938–136,483,040, 103 bases323025201510515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 9 kb of the gene's 42.9 kb; 7,074 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SEC16A gene: SEC16 homolog A, endoplasmic reticulum export factor. Retrieved 17 October 2026, from https://dantelabs.com/genes/sec16a

Vancouver

Dante Labs. SEC16A gene: SEC16 homolog A, endoplasmic reticulum export factor [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/sec16a

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